RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
SCAP-201ENST00000265565 PP2D1A8MPX8 630 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 NMT2O60551 498 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 IFNAR2P48551 515 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
SCAP-201ENST00000265565 PIGBQ92521 554 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 FBXO2Q9UK22 296 aaPredicted RBP18.27■□□□□ 0.52
SCAP-201ENST00000265565 DDX39AO00148 427 aaKnown RBP18.27■□□□□ 0.52
SCAP-201ENST00000265565 TRAF1Q13077 416 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 ZNF365Q70YC5 407 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 TPH2Q8IWU9 490 aa18.27■□□□□ 0.52
SCAP-201ENST00000265565 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
SCAP-201ENST00000265565 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
SCAP-201ENST00000265565 GNA14O95837 355 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 FKBP3Q00688 224 aaKnown RBP18.27■□□□□ 0.51
SCAP-201ENST00000265565 PRR16Q569H4 304 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 MFSD14BQ5SR56 506 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 RAB17Q9H0T7 212 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 SYNCQ9H7C4 482 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 PSTPIP2Q9H939 334 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 ABCC12Q96J65 1359 aa18.27■□□□□ 0.51
SCAP-201ENST00000265565 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 LGALS16A8MUM7 142 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 GSG1L2A8MUP6 293 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 USP17L2Q6R6M4 530 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 THAP9Q9H5L6 903 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 L2HGDHQ9H9P8 463 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 CLTAP09496 248 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 IFT74Q96LB3 600 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 STK38LQ9Y2H1 464 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 STK36Q9NRP7 1315 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
SCAP-201ENST00000265565 ARHGEF35A5YM69 484 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 UBE2Q2LH0YL09 131 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 CFBP00751 764 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
SCAP-201ENST00000265565 C6orf163Q5TEZ5 329 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
SCAP-201ENST00000265565 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
SCAP-201ENST00000265565 MAGEA9P43362 315 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
SCAP-201ENST00000265565 FAM212AQ96EL1 285 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 CUEDC2Q9H467 287 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 MLXIPQ9HAP2 919 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 SLAIN2Q9P270 581 aa18.26■□□□□ 0.51
SCAP-201ENST00000265565 CCDC169A6NNP5 214 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 IL6STP40189 918 aaPredicted RBP18.25■□□□□ 0.51
SCAP-201ENST00000265565 PLA2G4AP47712 749 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 EXOC3L4Q17RC7 722 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 DDX25Q9UHL0 483 aaKnown RBP18.25■□□□□ 0.51
SCAP-201ENST00000265565 CAMSAP1Q5T5Y3 1602 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 ESYT3A0FGR9 886 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 ATP1A1P05023 1023 aaKnown RBP18.25■□□□□ 0.51
SCAP-201ENST00000265565 CYP2D6P10635 497 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 KCNQ4P56696 695 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 UAP1Q16222 522 aaPredicted RBP18.25■□□□□ 0.51
SCAP-201ENST00000265565 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 RIN2Q8WYP3 895 aaPredicted RBP18.25■□□□□ 0.51
SCAP-201ENST00000265565 DDX12PQ92771 950 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 COA7Q96BR5 231 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 NR2F2P24468 414 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 SUSD4Q5VX71 490 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 REXO1L1PQ8IX06 675 aa18.25■□□□□ 0.51
SCAP-201ENST00000265565 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 LMTK2Q8IWU2 1503 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 E2F5Q15329 346 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 TRIM10Q9UDY6 481 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 PRDM4Q9UKN5 801 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
SCAP-201ENST00000265565 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■■■□□ 18.8
SCAP-201ENST00000265565 BIRC3Q13489 604 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 TAOK1Q7L7X3 1001 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 FMNL3Q8IVF7 1028 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 STIM2Q9P246 746 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 ATP8A1Q9Y2Q0 1164 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 NEXMIFQ5QGS0 1516 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 ALDH3A1P30838 453 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 ARL6IP4Q66PJ3 421 aaKnown RBP18.24■□□□□ 0.51
SCAP-201ENST00000265565 IGDCC4Q8TDY8 1250 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 AK8Q96MA6 479 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 PIGSQ96S52 555 aa18.24■□□□□ 0.51
SCAP-201ENST00000265565 A0A1B0GTH6 734 aa18.23■□□□□ 0.51
SCAP-201ENST00000265565 GTF2IP78347 998 aa18.23■□□□□ 0.51
SCAP-201ENST00000265565 APBA1Q02410 837 aa18.23■□□□□ 0.51
SCAP-201ENST00000265565 LRRN4CLQ8ND94 238 aa18.23■□□□□ 0.51
SCAP-201ENST00000265565 C8orf37Q96NL8 207 aa18.23■□□□□ 0.51
SCAP-201ENST00000265565 POLD4Q9HCU8 107 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms