RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PLEKP08567 350 aaPredicted RBP17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 BTDP43251 543 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 TROAPQ12815 778 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 NAA35Q5VZE5 725 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 FUT8Q9BYC5 575 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 NDUFAB1O14561 156 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 CCDC93Q567U6 631 aa17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 LSM14BQ9BX40 385 aaKnown RBP17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 PACSIN2Q9UNF0 486 aaPredicted RBP17.96■□□□□ 0.47
PDZRN3-201ENST00000263666 ZNF18P17022 549 aa17.96■□□□□ 0.46
PDZRN3-201ENST00000263666 GTF2IP78347 998 aa17.96■□□□□ 0.46
PDZRN3-201ENST00000263666 CYP4A11Q02928 519 aa17.96■□□□□ 0.46
PDZRN3-201ENST00000263666 SPATA31A5Q5VU36 1347 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 SPATA31A7Q8IWB4 1347 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 RNF225M0QZC1 329 aaPredicted RBP17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 CEP104O60308 925 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 STK4Q13043 487 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 PKN1Q16512 942 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 PMS1P54277 932 aaKnown RBP17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 SNAP25P60880 206 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 GNGT1P63211 74 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 NFRKBQ6P4R8 1299 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 RDH13Q8NBN7 331 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 MYO1CO00159 1063 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 SERPINB2P05120 415 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 TTC31Q49AM3 519 aaPredicted RBP17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 BCAS4Q8TDM0 211 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 LTN1O94822 1766 aa17.95■□□□□ 0.46
PDZRN3-201ENST00000263666 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 HGSO14964 777 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 ITPK1Q13572 414 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 DPP8Q6V1X1 898 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 KRT25Q7Z3Z0 450 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 H0YIN7 160 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 KCNJ6P48051 423 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 GUCY2DQ02846 1103 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 TXNRD3Q86VQ6 643 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 MEIS1O00470 390 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 POLD1P28340 1107 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 KCTD1Q719H9 257 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
PDZRN3-201ENST00000263666 LGALS16A8MUM7 142 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 KLHL30Q0D2K2 578 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 ANKRD40Q6AI12 368 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 GOLGA5Q8TBA6 731 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 FAM196BA6NMK8 535 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 GGCXP38435 758 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 ADCY7P51828 1080 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 MDM2Q00987 491 aaPredicted RBP17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 NOX5Q96PH1 765 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 UBLCP1Q8WVY7 318 aaPredicted RBP17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 LACRTQ9GZZ8 138 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 PCDHB13Q9Y5F0 798 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 NFAT5O94916 1531 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
PDZRN3-201ENST00000263666 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 SSR1P43307 286 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 ZYXQ15942 572 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 KSR1Q8IVT5 923 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 OGFOD1Q8N543 542 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 ARHGEF1Q92888 912 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 EXOC4Q96A65 974 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 ZBTB21Q9ULJ3 1066 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 FGFR2P21802 821 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 FAM71BQ8TC56 605 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 KRT12Q99456 494 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 NUP58Q9BVL2 599 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 KCNK3O14649 394 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 ABCB4P21439 1286 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 CCNE1P24864 410 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 KIF11P52732 1056 aa17.92■□□□□ 0.46
PDZRN3-201ENST00000263666 TBCAO75347 108 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 EEF1GP26641 437 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 SEC23AQ15436 765 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 MED15Q96RN5 788 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 KIAA1024Q9UPX6 916 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 FANCGO15287 622 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 TDP2O95551 362 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 DOK7Q18PE1 504 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms