RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 KRT86O43790 486 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 HNRNPH2P55795 449 aaKnown RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 MIIPQ5JXC2 388 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 GPR101Q96P66 508 aaPredicted RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 NHEJ1Q9H9Q4 299 aaPredicted RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 SAR1BQ9Y6B6 198 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 BTDP43251 543 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 MTIF2P46199 727 aaKnown RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 WDR93Q6P2C0 686 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 KIAA1328Q86T90 577 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 TBCKQ8TEA7 893 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 EXOC4Q96A65 974 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
DDX56-201ENST00000258772 SNED1Q8TER0 1413 aa17.03■□□□□ 0.32
DDX56-201ENST00000258772 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
DDX56-201ENST00000258772 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
DDX56-201ENST00000258772 LACRTQ9GZZ8 138 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
DDX56-201ENST00000258772 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
DDX56-201ENST00000258772 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 RCCD1A6NED2 376 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.31
DDX56-201ENST00000258772 CASP8Q14790 479 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 CNNM4Q6P4Q7 775 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.31
DDX56-201ENST00000258772 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 CALML4Q96GE6 196 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 PIGSQ96S52 555 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 PSD3Q9NYI0 1048 aa17.02■□□□□ 0.31
DDX56-201ENST00000258772 BIN2Q9UBW5 565 aaPredicted RBP17.02■□□□□ 0.31
DDX56-201ENST00000258772 FIGNQ5HY92 759 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 KIAA0895Q8NCT3 520 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 CEP95Q96GE4 821 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 PCMTD1Q96MG8 357 aaPredicted RBP17.01■□□□□ 0.31
DDX56-201ENST00000258772 MMS19Q96T76 1030 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
DDX56-201ENST00000258772 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 NKRFO15226 690 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX56-201ENST00000258772 SRGAP2O75044 1071 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 IPO7O95373 1038 aaKnown RBP17.01■□□□□ 0.31
DDX56-201ENST00000258772 USP14P54578 494 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 CDK17Q00537 523 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
DDX56-201ENST00000258772 CENPPQ6IPU0 288 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
DDX56-201ENST00000258772 HPS3Q969F9 1004 aa17.01■□□□□ 0.31
DDX56-201ENST00000258772 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
DDX56-201ENST00000258772 TXKP42681 527 aa17■□□□□ 0.31
DDX56-201ENST00000258772 SV2BQ7L1I2 683 aa17■□□□□ 0.31
DDX56-201ENST00000258772 CD209Q9NNX6 404 aa17■□□□□ 0.31
DDX56-201ENST00000258772 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
DDX56-201ENST00000258772 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 N4BP1O75113 896 aaKnown RBP16.99■□□□□ 0.31
DDX56-201ENST00000258772 GRB10Q13322 594 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 FKBP15Q5T1M5 1219 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 MTMR9Q96QG7 549 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 BLOC1S4Q9NUP1 217 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 DUSP10Q9Y6W6 482 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 NOVP48745 357 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 PURBQ96QR8 312 aaKnown RBP16.99■□□□□ 0.31
DDX56-201ENST00000258772 TMEM260Q9NX78 707 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 VPS18Q9P253 973 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 BTAF1O14981 1849 aa16.99■□□□□ 0.31
DDX56-201ENST00000258772 MYMKA6NI61 221 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 PLCG2P16885 1265 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 RFC4P35249 363 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 GPSM2P81274 684 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 IQCDQ96DY2 449 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 LRWD1Q9UFC0 647 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
DDX56-201ENST00000258772 RHBDL3P58872 404 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 UNC13DQ70J99 1090 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 ZBTB9Q96C00 473 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 CAPZA3Q96KX2 299 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 PLAGL2Q9UPG8 496 aa16.98■□□□□ 0.31
DDX56-201ENST00000258772 PVALEFA0A1B0GWK0 134 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 ZNF263O14978 683 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 IL1R1P14778 569 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 HNRNPH3P31942 346 aaKnown RBP16.97■□□□□ 0.31
DDX56-201ENST00000258772 LMAN1P49257 510 aa16.97■□□□□ 0.31
DDX56-201ENST00000258772 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms