RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
DDX39A-201ENST00000242776 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 IQSEC1Q6DN90 963 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 FAM160B2Q86V87 743 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 STAG1Q8WVM7 1258 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
DDX39A-201ENST00000242776 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 FTOQ9C0B1 505 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX39A-201ENST00000242776 ECHDC1Q9NTX5 307 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 TNKSO95271 1327 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 AAK1Q2M2I8 961 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 SPRED2Q7Z698 418 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 CCPG1Q9ULG6 757 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
DDX39A-201ENST00000242776 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 COL4A4P53420 1690 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-201ENST00000242776 ERC2O15083 957 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 NMT2O60551 498 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
DDX39A-201ENST00000242776 PTPRSQ13332 1948 aa16.33■□□□□ 0.21
DDX39A-201ENST00000242776 FAM86C2PA6NEL3 165 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 PATL2C9JE40 543 aaKnown RBP16.33■□□□□ 0.2
DDX39A-201ENST00000242776 FDX1P10109 184 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 SLC16A2P36021 539 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 PDE4BQ07343 736 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 OR6J1Q8NGC5 347 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 LRFN3Q9BTN0 628 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
DDX39A-201ENST00000242776 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-201ENST00000242776 TANC1Q9C0D5 1861 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 TRANK1O15050 2925 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 ACTN1P12814 892 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 GNAT2P19087 354 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 PPARAQ07869 468 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-201ENST00000242776 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 TMCO2Q7Z6W1 182 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-201ENST00000242776 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 NAPBQ9H115 298 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 VTA1Q9NP79 307 aa16.32■□□□□ 0.2
DDX39A-201ENST00000242776 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
DDX39A-201ENST00000242776 CALML3P27482 149 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 ALDH5A1P51649 535 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-201ENST00000242776 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
DDX39A-201ENST00000242776 TAP1Q03518 808 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 TTBK2Q6IQ55 1244 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 COPS5Q92905 334 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 KHSRPQ92945 711 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX39A-201ENST00000242776 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 Q9Y3F1 56 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
DDX39A-201ENST00000242776 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-201ENST00000242776 NFIBO00712 420 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 PFKMP08237 780 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 GRB10Q13322 594 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-201ENST00000242776 SEZ6LQ9BYH1 1024 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
DDX39A-201ENST00000242776 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
DDX39A-201ENST00000242776 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 TLL1O43897 1013 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 CPT1AP50416 773 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 HERC6Q8IVU3 1022 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 HLA-CQ95604 372 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 SLC9A7Q96T83 725 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 GPCPD1Q9NPB8 672 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 MTUS1Q9ULD2 1270 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
DDX39A-201ENST00000242776 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-201ENST00000242776 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 HDAC1Q13547 482 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-201ENST00000242776 TMEM31Q5JXX7 168 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 GDPD5Q8WTR4 605 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
DDX39A-201ENST00000242776 ADD3Q9UEY8 706 aaKnown RBP16.29■□□□□ 0.2
DDX39A-201ENST00000242776 COG5Q9UP83 839 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms