RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TEX9Q8N6V9 391 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 CNOT6LQ96LI5 555 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 SF3A3Q12874 501 aaKnown RBP eCLIP8.93□□□□□ -0.985e-18■■■■□ 21.5
APOB-201ENST00000233242 ZNF658Q5TYW1 1059 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 MCF2L2Q86YR7 1114 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 FGD4Q96M96 766 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 LCMT1Q9UIC8 334 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 ANAPC5Q9UJX4 755 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 USP19O94966 1318 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 A0A0D9SFI3 127 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 GRID2IPA4D2P6 1211 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 POLR2FP61218 127 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 SRRM1Q8IYB3 904 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 ZNF277Q9NRM2 450 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 ZFXP17010 805 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 MX2P20592 715 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 PTH1RQ03431 593 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 PNMA2Q9UL42 364 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 PAIP2BQ9ULR5 123 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 PODXLO00592 558 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 FKBP3Q00688 224 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 BIRC2Q13490 618 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 FAM26FQ5R3K3 315 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 ADAM9Q13443 819 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 KRT81Q14533 505 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 NBPF20Q3BBV1 942 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 TBC1D1Q86TI0 1168 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 CXorf56Q9H5V9 222 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 KDRP35968 1356 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 ESRRAP11474 423 aaPredicted RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 KRT24Q2M2I5 525 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 NCAPH2Q6IBW4 605 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 DYMQ7RTS9 669 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 PRPF31Q8WWY3 499 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 VPS54Q9P1Q0 977 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 AFG3L2Q9Y4W6 797 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 MSH2P43246 934 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 C2orf54Q08AI8 447 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 NELFCDQ8IXH7 590 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 NOVA2Q9UNW9 492 aaKnown RBP8.93□□□□□ -0.98
APOB-201ENST00000233242 SPATA31E1Q6ZUB1 1445 aa8.93□□□□□ -0.98
APOB-201ENST00000233242 SCG2P13521 617 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 DR1Q01658 176 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SCRN1Q12765 414 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ARMT1Q9H993 441 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ZNF148Q9UQR1 794 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 MYO1FO00160 1098 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 NT5C2P49902 561 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 MYO1EQ12965 1108 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 NEK8Q86SG6 692 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ZSCAN10Q96SZ4 725 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 NHEJ1Q9H9Q4 299 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 PANK4Q9NVE7 773 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 GEMIN8Q9NWZ8 242 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 TMEM232C9JQI7 657 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SLC30A9Q6PML9 568 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ACRBPQ8NEB7 543 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 P2RX5Q93086 422 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SOWAHDA6NJG2 315 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 MT-ND3P03897 115 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 STX1BP61266 288 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 YWHAGP61981 247 aaKnown RBP eCLIP8.92□□□□□ -0.98
APOB-201ENST00000233242 PLA2G4DQ86XP0 818 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 CCDC138Q96M89 665 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PITPNM3Q9BZ71 974 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 CLIC4Q9Y696 253 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ZMYND10O75800 440 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SERPING1P05155 500 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PLCB4Q15147 1175 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ANKRD7Q92527 254 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 RNF26Q9BY78 433 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 PCDHA13Q9Y5I0 950 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 DNMT1P26358 1616 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 GGCXP38435 758 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 NLRP14Q86W24 1093 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SPATA5Q8NB90 893 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 OCA2Q04671 838 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PPARAQ07869 468 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ARHGAP44Q17R89 818 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 CATSPER1Q8NEC5 780 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 TRIM55Q9BYV6 548 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 IPO11Q9UI26 975 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 EXOC1LA0A1B0GW35 172 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 SGO2Q562F6 1265 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 GRAMD1AQ96CP6 724 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 NOC2LQ9Y3T9 749 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 GOLGA8CPA6NN73 597 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ATF7P17544 494 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 EIF4A3P38919 411 aaKnown RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 MAST3O60307 1309 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PSMD2Q13200 908 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms