RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 CCDC40Q4G0X9 1142 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 SMARCAL1Q9NZC9 954 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 LRWD1Q9UFC0 647 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 CAPN6Q9Y6Q1 641 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 SRGNP10124 158 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 PRLRP16471 622 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 RXRBP28702 533 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 TRAPPC3LQ5T215 181 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 EMC10Q5UCC4 262 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 PHF20Q9BVI0 1012 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 PATL2C9JE40 543 aaKnown RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 TACC1O75410 805 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 PPP1R37O75864 691 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 DNM2P50570 870 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 PMS1P54277 932 aaKnown RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ATP2C1P98194 919 aaPredicted RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 MFSD6Q6ZSS7 791 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 CCDC13Q8IYE1 715 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF654Q8IZM8 581 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ADSSL1Q8N142 457 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 OSBPL9Q96SU4 736 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 RNF26Q9BY78 433 aaPredicted RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 NYXQ9GZU5 481 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 EP400Q96L91 3159 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF263O14978 683 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 XBP1P17861 261 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 SCP2P22307 547 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ZBED6P86452 979 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 APBA1Q02410 837 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 PTGDRQ13258 359 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 TTC38Q5R3I4 469 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 NLRP14Q86W24 1093 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 CCDC43Q96MW1 224 aaKnown RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 RGPD3A6NKT7 1758 aaPredicted RBP19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 RGPD4Q7Z3J3 1758 aa19.65■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF233A6NK53 670 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 B4DLN1 442 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 TRIM21P19474 475 aaKnown RBP19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 TDO2P48775 406 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 HDLBPQ00341 1268 aaKnown RBP19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 FKBP15Q5T1M5 1219 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 WLSQ5T9L3 541 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 NFRKBQ6P4R8 1299 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 IQCKQ8N0W5 287 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 MYCBPAPQ8TBZ2 947 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 CCT8L2Q96SF2 557 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 THAP9Q9H5L6 903 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 MLXIPQ9HAP2 919 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 EHD2Q9NZN4 543 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 GGA2Q9UJY4 613 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 PDE8BO95263 885 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 KLK7P49862 253 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 RCAN1P53805 252 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 PKN1Q16512 942 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 CCDC96Q2M329 555 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 CFAP58Q5T655 872 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 FAM212AQ96EL1 285 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 ZNF512BQ96KM6 892 aaPredicted RBP19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 SETDB2Q96T68 719 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 PYM1Q9BRP8 204 aaKnown RBP19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 NUP58Q9BVL2 599 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 SLC40A1Q9NP59 571 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 HYOU1Q9Y4L1 999 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 A0A1B0GUL6 1792 aa19.64■□□□□ 0.73
CDKN1B-201ENST00000228872 ERICH2A1L162 156 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 PRDM1O75626 825 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 TCP1P17987 556 aaKnown RBP19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 NR1D1P20393 614 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 NF2P35240 595 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 RFC4P35249 363 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 SEC24CP53992 1094 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 ERFEQ4G0M1 354 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 C8orf74Q6P047 294 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 N4BP2L2Q92802 583 aaPredicted RBP19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 SH2D4AQ9H788 454 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 IFT88Q13099 833 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 CCDC181Q5TID7 509 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 KRT26Q7Z3Y9 468 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 RETREG2Q8NC44 543 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 EXOC1Q9NV70 894 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 MAGEC2Q9UBF1 373 aaPredicted RBP19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 MROH5Q6ZUA9 1318 aa19.63■□□□□ 0.73
CDKN1B-201ENST00000228872 MOCS3O95396 460 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 SF3B3Q15393 1217 aaKnown RBP19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 SPA17Q15506 151 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 CEP85LQ5SZL2 805 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 TMTC2Q8N394 836 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 MIEF2Q96C03 454 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 PSMB7Q99436 277 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 MBD4O95243 580 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 CXCR5P32302 372 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 CDK17Q00537 523 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 C6orf89Q6UWU4 347 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 TNFRSF25Q93038 417 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 TRIM47Q96LD4 638 aa19.62■□□□□ 0.73
CDKN1B-201ENST00000228872 CENPHQ9H3R5 247 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms