RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 INO80BQ9C086 356 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-201ENST00000225964 SLC12A6Q9UHW9 1150 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 PTPN22Q9Y2R2 807 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.09
COL1A1-201ENST00000225964 NSFP46459 744 aaKnown RBP14.46□□□□□ -0.1
COL1A1-201ENST00000225964 PSPC1Q8WXF1 523 aaKnown RBP14.46□□□□□ -0.1
COL1A1-201ENST00000225964 KMT5AQ9NQR1 393 aa14.46□□□□□ -0.1
COL1A1-201ENST00000225964 OLA1Q9NTK5 396 aaKnown RBP14.46□□□□□ -0.1
COL1A1-201ENST00000225964 TYW1Q9NV66 732 aaKnown RBP14.46□□□□□ -0.1
COL1A1-201ENST00000225964 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.1
COL1A1-201ENST00000225964 HNRNPDLO14979 420 aaKnown RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MFAP3P55082 362 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 KIAA1024Q9UPX6 916 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 KDM5AP29375 1690 aaKnown RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ODR4Q5SWX8 454 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MYLK4Q86YV6 388 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MCUQ8NE86 351 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF148Q9UQR1 794 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 SAR1BQ9Y6B6 198 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ATP8B3O60423 1300 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 SLC12A1Q13621 1099 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 GALNT17Q6IS24 598 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 C17orf53Q8N3J3 647 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 GJA10Q969M2 543 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 GREM2Q9H772 168 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MAP3K15Q6ZN16 1313 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 EEPD1Q7L9B9 569 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 TRIM58Q8NG06 486 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 ANXA13P27216 316 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 IQCB1Q15051 598 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MICAL1Q8TDZ2 1067 aa14.45□□□□□ -0.1
COL1A1-201ENST00000225964 MYL3P08590 195 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 UHMK1Q8TAS1 419 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 CDKL2Q92772 493 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 ATP6V1E2Q96A05 226 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 LARSQ9P2J5 1176 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 PLXNC1O60486 1568 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 CDR2Q01850 454 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 KRT33BQ14525 404 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 XPO4Q9C0E2 1151 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 ADD3Q9UEY8 706 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 UBN2Q6ZU65 1347 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 BAG2O95816 211 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 PTK2Q05397 1052 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 FNDC3AQ9Y2H6 1198 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 WDR62O43379 1518 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 A0A0D9SFI3 127 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 COBLO75128 1261 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF772Q68DY9 489 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 HYOU1Q9Y4L1 999 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 SYMPKQ92797 1274 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 TTLL1O95922 423 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 COG7P83436 770 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 CACTINQ8WUQ7 758 aaKnown RBP14.44□□□□□ -0.1
COL1A1-201ENST00000225964 ATP6V0A1Q93050 837 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 LRGUKQ96M69 825 aa14.44□□□□□ -0.1
COL1A1-201ENST00000225964 LOC102724428A0A0B4J2F2 783 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 PPFIA4O75335 1185 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 RAD17O75943 681 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 RASSF2P50749 326 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 SIK1P57059 783 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 TTC30BQ8N4P2 665 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 PDZD8Q8NEN9 1154 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 AOC3Q16853 763 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 FAM71BQ8TC56 605 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 FAM149B1Q96BN6 582 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 SLC16A2P36021 539 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 CCNYQ8ND76 341 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 SDCCAG3Q96C92 435 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 PGBD1Q96JS3 809 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 AMNQ9BXJ7 453 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-201ENST00000225964 DBN1Q16643 649 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 MAP3K21Q5TCX8 1036 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 MAP7D3Q8IWC1 876 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
COL1A1-201ENST00000225964 A6NNZ2 444 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 SERPINB2P05120 415 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 CLNS1AP54105 237 aaKnown RBP14.43□□□□□ -0.1
COL1A1-201ENST00000225964 TUBB8Q3ZCM7 444 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 CCDC51Q96ER9 411 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 NT5C1BQ96P26 610 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 PCIF1Q9H4Z3 704 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 VCX3AQ9NNX9 186 aa14.43□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF215Q9UL58 517 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-201ENST00000225964 HSPD1P10809 573 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms