RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LEMD3Q9Y2U8 911 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 FLT1P17948 1338 aa19.3■□□□□ 0.68
USB1-201ENST00000219281 FCER1AP12319 257 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 MTIF2P46199 727 aaKnown RBP19.29■□□□□ 0.68
USB1-201ENST00000219281 LETM2Q2VYF4 491 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 CRY2Q49AN0 593 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 SPTY2D1Q68D10 685 aaPredicted RBP19.29■□□□□ 0.68
USB1-201ENST00000219281 ZNF662Q6ZS27 426 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 SLC44A5Q8NCS7 719 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 EHBP1Q8NDI1 1231 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 TRIM9Q9C026 710 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 CPVLQ9H3G5 476 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 ACBD3Q9H3P7 528 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 CWC15Q9P013 229 aaKnown RBP19.29■□□□□ 0.68
USB1-201ENST00000219281 DUSP10Q9Y6W6 482 aa19.29■□□□□ 0.68
USB1-201ENST00000219281 BICDL2A1A5D9 508 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 CCNT1O60563 726 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 TRIM37O94972 964 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 SERPINB2P05120 415 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 ASIC1P78348 528 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 ZBED6P86452 979 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 SEMA3FQ13275 785 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 ZNF444Q8N0Y2 327 aaPredicted RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 PROM2Q8N271 834 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 CCDC47Q96A33 483 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 TMEM47Q9BQJ4 181 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 NOC4LQ9BVI4 516 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 CUEDC2Q9H467 287 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 TMEM51Q9NW97 253 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 EIF3CLB5ME19 914 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 OR52Z1P0C646 297 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 TNNT3P45378 269 aaPredicted RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 CYP27A1Q02318 531 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 GRIK5Q16478 980 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 LEKR1Q6ZMV7 388 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 CCDC170Q8IYT3 715 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 RETREG2Q8NC44 543 aa19.28■□□□□ 0.68
USB1-201ENST00000219281 EIF3CQ99613 913 aaKnown RBP19.28■□□□□ 0.68
USB1-201ENST00000219281 PALM3A6NDB9 673 aaPredicted RBP19.27■□□□□ 0.68
USB1-201ENST00000219281 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.68
USB1-201ENST00000219281 ZNF185O15231 689 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 MIIPQ5JXC2 388 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 CAGE1Q8TC20 777 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 AK8Q96MA6 479 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 MAGEF1Q9HAY2 307 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 MACROD2A1Z1Q3 448 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 ZMYND10O75800 440 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 NAPAP54920 295 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 GPSM2P81274 684 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 CKAP4Q07065 602 aaKnown RBP19.27■□□□□ 0.68
USB1-201ENST00000219281 SLC27A3Q5K4L6 730 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 HPS3Q969F9 1004 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 C7orf25Q9BPX7 421 aa19.27■□□□□ 0.68
USB1-201ENST00000219281 UBR3Q6ZT12 1888 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 KLRF2D3W0D1 207 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
USB1-201ENST00000219281 MCM3P25205 808 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 TECP42680 631 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 TMED8Q6PL24 325 aaPredicted RBP19.26■□□□□ 0.67
USB1-201ENST00000219281 TGFBRAP1Q8WUH2 860 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 MED4Q9NPJ6 270 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 NONOQ15233 471 aaKnown RBP eCLIP19.26■□□□□ 0.67
USB1-201ENST00000219281 MAP9Q49MG5 647 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 KRT25Q7Z3Z0 450 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 AMOTL1Q8IY63 956 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 RPGRIP1Q96KN7 1286 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 ZMYND12Q9H0C1 365 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 VIPAS39Q9H9C1 493 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 JADE2Q9NQC1 790 aa19.26■□□□□ 0.67
USB1-201ENST00000219281 SAP30BPQ9UHR5 308 aaKnown RBP19.26■□□□□ 0.67
USB1-201ENST00000219281 TARSL2A2RTX5 802 aaKnown RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 SMCO2A6NFE2 343 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 PDE2AO00408 941 aaPredicted RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 IDEP14735 1019 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 DDR1Q08345 913 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 GDAP1L1Q96MZ0 367 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 FAM204AQ9H8W3 233 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 LCMT1Q9UIC8 334 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 SYF2O95926 243 aaKnown RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 PLEKP08567 350 aaPredicted RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 KIF5AQ12840 1032 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 FKBP15Q5T1M5 1219 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 C15orf52Q6ZUT6 534 aaKnown RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 ZSCAN29Q8IWY8 852 aaPredicted RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 PURBQ96QR8 312 aaKnown RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 SLC39A2Q9NP94 309 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 LRWD1Q9UFC0 647 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 FEZ2Q9UHY8 353 aaPredicted RBP19.25■□□□□ 0.67
USB1-201ENST00000219281 HPCAL4Q9UM19 191 aa19.25■□□□□ 0.67
USB1-201ENST00000219281 A0A1W2PQJ5 194 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 ZNF263O14978 683 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 RNF40O75150 1001 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 RASA1P20936 1047 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 VAV2P52735 878 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 KRT26Q7Z3Y9 468 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms