RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Herc3A6H6S0 1050 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ankrd35E9Q9D8 996 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Tdo2P48776 406 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Rnf216P58283 853 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Xxylt1Q3U4G3 392 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ildr1Q8CBR1 537 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Nr3c2Q8VII8 978 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Dpp7Q9ET22 506 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Mkrn1Q9QXP6 481 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Nek3Q9R0A5 511 aa17.29■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Megf6Q80V70 1572 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Gm15448F6PZL4 682 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Mpp3O88910 568 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 LtkP08923 888 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Pank2Q3U4S0 443 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Pnma5Q5DTT8 618 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Enox1Q8BHR2 643 aaKnown RBP17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ints4Q8CIM8 964 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Atp5c1Q91VR2 298 aaKnown RBP17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Krtap5-3Q9D226 196 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Xpo4Q9ESJ0 1151 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Tfr2Q9JKX3 798 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Slc26a4Q9R155 780 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ttc6G3UYY4 1857 aa17.28■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Pcdh11xF6ZNL5 1338 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Cul4bA2A432 970 aaKnown RBP17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Q3UJP5 209 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Nt5c2Q3V1L4 560 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Igf2bp2Q5SF07 592 aaKnown RBP17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Slu7Q8BHJ9 585 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Spata21Q8BHW6 681 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ccdc122Q8BVN0 290 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ifih1Q8R5F7 1025 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 BaatQ91X34 420 aa17.27■□□□□ 0.36
Ldb3-208ENSMUST00000228044 Ccdc88cQ6VGS5 2009 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Apol7aB2RT54 418 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Zc3h7bF8VPP8 982 aaKnown RBP17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pcdha4O88689 947 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Nek1P51954 1203 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pcif1P59114 706 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pls1Q3V0K9 630 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Adck2Q6NSR3 617 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ccdc148Q6P5U8 527 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Lmbrd1Q8K0B2 537 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Nrbp1Q99J45 535 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ppp1r3gQ9CW07 347 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Q9DAQ4 598 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Il21rQ9JHX3 529 aa17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ddx20Q9JJY4 825 aaKnown RBP17.27■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Gm973E9Q295 1059 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Dnajb6O54946 365 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 PtpraP18052 829 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Sv2cQ69ZS6 727 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Cep135Q6P5D4 1140 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Fbxo10Q7TQF2 950 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Anks1bQ8BIZ1 1259 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Sapcd2Q9D818 391 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Cbx6Q9DBY5 414 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Magi2Q9WVQ1 1275 aa17.26■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Sbf2E9PXF8 1872 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pappa2E9PZ87 1789 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Zkscan4Q5SZT6 480 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Rgl1Q60695 768 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Eif3j2Q66JS6 263 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Kcnf1Q7TSH7 493 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Bri3bpQ8BXV2 253 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ankk1Q8BZ25 745 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Eps8l1Q8R5F8 716 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 PdhbQ9D051 359 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Usp14Q9JMA1 493 aaKnown RBP17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Brca1P48754 1812 aa17.25■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Skint3A7TZF0 458 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Mroh8E9PYI4 1049 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pla2g4bP0C871 782 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Tpm3P21107 285 aaKnown RBP17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Kcnb1Q03717 857 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Nlrp2Q4PLS0 1046 aaKnown RBP17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Tmx1Q8VBT0 278 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Aldh1b1Q9CZS1 519 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Lypla2Q9WTL7 231 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 AU015836B2RUM3 263 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ppp1r9aH3BJD6 1292 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Esr2O08537 530 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Mmp10O55123 476 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Tfcp2l1Q3UNW5 479 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ano6Q6P9J9 911 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Sval3Q76I99 144 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Trim9Q8C7M3 817 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Acat1Q8QZT1 424 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Krt79Q8VED5 531 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Tab2Q99K90 693 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 NapaQ9DB05 295 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pkd2l2Q9JLG4 621 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pdcd6ipQ9WU78 869 aaKnown RBP17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Plcb1Q9Z1B3 1216 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 GsdmeQ9Z2D3 512 aa17.24■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Pcdh15Q99PJ1 1943 aa17.23■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Ripor3A1L3T7 938 aa17.23■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Flot1O08917 428 aa17.23■□□□□ 0.35
Ldb3-208ENSMUST00000228044 Brd9Q3UQU0 596 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms