RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 EhhadhQ9DBM2 718 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Ubiad1Q9DC60 336 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Ttc6G3UYY4 1857 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Bpifb4A2BGH0 617 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Jakmip2D3YXK0 820 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Parp1P11103 1013 aaKnown RBP16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Mcm6P97311 821 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Foxn3Q499D0 457 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Asic1Q6NXK8 526 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Slc9c1Q6UJY2 1175 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Nop9Q8BMC4 636 aaKnown RBP16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Tmem63cQ8CBX0 802 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Tmem134Q8R0J4 195 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Ndfip2Q91ZP6 311 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Kremen1Q99N43 473 aa16.71■□□□□ 0.27
Trim11-203ENSMUST00000108810 Mageb2A2AHM0 380 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Fkbp3Q62446 224 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Nap1l4Q78ZA7 375 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Brd3Q8K2F0 726 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Tgm5Q9D7I9 724 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Tfr2Q9JKX3 798 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Scn3aA2ASI5 1947 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Gm45140A0A0N4SUM8 220 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 AoahO35298 574 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Mpp3O88910 568 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Nedd4P46935 887 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Gpatch11Q3UFS4 262 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Gucy2cQ3UWA6 1072 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Lrrfip1Q3UZ39 729 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Jakmip3Q5DTN8 844 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Peg10Q7TN75 958 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Igdcc3Q8BQC3 813 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 MyripQ8K3I4 856 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Dcaf8Q8N7N5 591 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ifih1Q8R5F7 1025 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Mical1Q8VDP3 1048 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Gpsm2Q8VDU0 679 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Krt79Q8VED5 531 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Gbp7Q91Z40 638 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Dhx30Q99PU8 1217 aaKnown RBP16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Copb1Q9JIF7 953 aa16.7■□□□□ 0.26
Trim11-203ENSMUST00000108810 Rad51bO35719 350 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Setd4P58467 439 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Lgr6Q3UVD5 967 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Nxf2Q4ZGD8 691 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Atp13a3Q5XF89 1219 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Olfr832Q7TRG9 312 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Scfd2Q8BTY8 684 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 GrapQ9CX99 217 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Efhd1Q9D4J1 240 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Nf2P46662 596 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Trpc6Q61143 930 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Thap3Q8BJ25 218 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Spire2Q8K1S6 718 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ddx27Q921N6 760 aaKnown RBP16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Rhobtb3Q9CTN4 611 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 SelenooQ9DBC0 667 aa16.69■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ms4a1P19437 291 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ovgp1Q62010 721 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Snapc2Q91XA5 359 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Mrpl11Q9CQF0 192 aaKnown RBP16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ccdc88cQ6VGS5 2009 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Pcdha4O88689 947 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Man1a2P39098 641 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Stim1P70302 685 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Lrrc55Q3UY51 311 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Prr7Q3V0I2 269 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Foxd1Q61345 456 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Vil1Q62468 827 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Stxbp2Q64324 593 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Kdm1aQ6ZQ88 853 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 LdhdQ7TNG8 484 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Necab1Q8BG18 352 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Kbtbd13Q8C828 458 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Dppa3Q8QZY3 150 aa16.68■□□□□ 0.26
Trim11-203ENSMUST00000108810 Mical3Q8CJ19 1993 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ccdc121E9Q6D3 323 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Rfpl4bJ3QPR6 266 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Pde4aO89084 844 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Trim30aP15533 496 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Cap1P40124 474 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Pcif1P59114 706 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Acot10Q32MW3 439 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Sfi1Q3UZY0 1216 aaKnown RBP16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Sdccag8Q80UF4 717 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Q8C5C9 218 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Kbtbd4Q8R179 534 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Bst2Q8R2Q8 172 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 BaatQ91X34 420 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Mis18aQ9CZJ6 204 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 PatjQ63ZW7 1834 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ugt1a8D3Z748 530 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ugt1a10E9PXN7 530 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Ssrp1Q08943 708 aaKnown RBP16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Map3k9Q3U1V8 1077 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Hoxa13Q62424 386 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 CtifQ6PEE2 600 aaKnown RBP16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Tut1Q8R3F9 869 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Exoc1Q8R3S6 894 aa16.67■□□□□ 0.26
Trim11-203ENSMUST00000108810 Rab3il1Q8VDV3 383 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms