RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
SDHD-209ENST00000640554 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
SDHD-209ENST00000640554 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
SDHD-209ENST00000640554 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
SDHD-209ENST00000640554 CYP39A1Q9NYL5 469 aa16.6■□□□□ 0.25
SDHD-209ENST00000640554 B4DLN1 442 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
SDHD-209ENST00000640554 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
SDHD-209ENST00000640554 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
SDHD-209ENST00000640554 NSMFQ6X4W1 530 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 SGMS1Q86VZ5 419 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 FBXO11Q86XK2 927 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 MCF2L2Q86YR7 1114 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 SAMD3Q8N6K7 520 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 MTMR8Q96EF0 704 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 MPHOSPH6Q99547 160 aaKnown RBP16.59■□□□□ 0.25
SDHD-209ENST00000640554 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 MRPL11Q9Y3B7 192 aaKnown RBP16.59■□□□□ 0.25
SDHD-209ENST00000640554 ABCB11O95342 1321 aa16.59■□□□□ 0.25
SDHD-209ENST00000640554 ZBTB5O15062 677 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 PSMA5P28066 241 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
SDHD-209ENST00000640554 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 STAG2Q8N3U4 1231 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 TRPV1Q8NER1 839 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 CLEC4DQ8WXI8 215 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 MAP3K20Q9NYL2 800 aaKnown RBP16.58■□□□□ 0.24
SDHD-209ENST00000640554 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 CENPFP49454 3210 aa16.58■□□□□ 0.24
SDHD-209ENST00000640554 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
SDHD-209ENST00000640554 AKR1A1P14550 325 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 BAATQ14032 418 aaPredicted RBP16.57■□□□□ 0.24
SDHD-209ENST00000640554 QRICH1Q2TAL8 776 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 RNF207Q6ZRF8 634 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 SENP2Q9HC62 589 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 FAM184BQ9ULE4 1060 aa16.57■□□□□ 0.24
SDHD-209ENST00000640554 COL11A1P12107 1806 aaPredicted RBP16.56■□□□□ 0.24
SDHD-209ENST00000640554 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 NFIBO00712 420 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
SDHD-209ENST00000640554 RARBP10826 455 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 RCAN1P53805 252 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 CNTN2Q02246 1040 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 MORC4Q8TE76 937 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 NUP133Q8WUM0 1156 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 PAWRQ96IZ0 340 aaKnown RBP16.56■□□□□ 0.24
SDHD-209ENST00000640554 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
SDHD-209ENST00000640554 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.56■□□□□ 0.24
SDHD-209ENST00000640554 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 USH1GQ495M9 461 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 FGD4Q96M96 766 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
SDHD-209ENST00000640554 DNM1LO00429 736 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 RPS6P62753 249 aaKnown RBP16.54■□□□□ 0.24
SDHD-209ENST00000640554 FGD1P98174 961 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 RRP36Q96EU6 259 aaKnown RBP16.54■□□□□ 0.24
SDHD-209ENST00000640554 C11orf49Q9H6J7 331 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 RBM28Q9NW13 759 aaKnown RBP16.54■□□□□ 0.24
SDHD-209ENST00000640554 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
SDHD-209ENST00000640554 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
SDHD-209ENST00000640554 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
SDHD-209ENST00000640554 GHRHRQ02643 423 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 RNF180Q86T96 592 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 DPF3Q92784 378 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
SDHD-209ENST00000640554 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
SDHD-209ENST00000640554 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
SDHD-209ENST00000640554 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
SDHD-209ENST00000640554 KBTBD13C9JR72 458 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 CYTH3O43739 400 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 COL6A1P12109 1028 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 TAL1P17542 331 aaPredicted RBP16.52■□□□□ 0.24
SDHD-209ENST00000640554 CALML3P27482 149 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 ALDH5A1P51649 535 aaPredicted RBP16.52■□□□□ 0.24
SDHD-209ENST00000640554 PRPF38BQ5VTL8 546 aaKnown RBP16.52■□□□□ 0.24
SDHD-209ENST00000640554 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
SDHD-209ENST00000640554 PIGSQ96S52 555 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms