RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TMED8Q6PL24 325 aaPredicted RBP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 PABPC5Q96DU9 382 aaKnown RBP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 MEIS3Q99687 375 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 KATNBL1Q9H079 304 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 KANSL2Q9H9L4 492 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 Q9Y3F1 56 aa13.29□□□□□ -0.28
PTP4A1-207ENST00000639568 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 ASB14A6NK59 587 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 M0R296 226 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 GNAI3P08754 354 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 SMPD1P17405 629 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 MTX1Q13505 466 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 IQSEC1Q6DN90 963 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 RNF135Q8IUD6 432 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 CHST13Q8NET6 341 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 FGD4Q96M96 766 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 ZNF318Q5VUA4 2279 aa13.28□□□□□ -0.28
PTP4A1-207ENST00000639568 ATP2A1O14983 1001 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 GJB5O95377 273 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 EVX2Q03828 476 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 TNNI3KQ59H18 835 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 GPR108Q9NPR9 543 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 FPGT-TNNI3KV9GXZ4 949 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 FOCADQ5VW36 1801 aa13.27□□□□□ -0.29
PTP4A1-207ENST00000639568 USP17L12C9JPN9 530 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 USP17L21D6R901 530 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 MYL3P08590 195 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 PTGS1P23219 599 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 ID4P47928 161 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 ALDH1L2Q3SY69 923 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 NUP88Q99567 741 aaPredicted RBP13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 RIOK1Q9BRS2 568 aaKnown RBP13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 CLDND1Q9NY35 253 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 ZNFX1Q9P2E3 1918 aaKnown RBP13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 COG6Q9Y2V7 657 aa13.26□□□□□ -0.29
PTP4A1-207ENST00000639568 NCK2O43639 380 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 CYP2D6P10635 497 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 CPT1AP50416 773 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 DEFB103AP81534 67 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 SMAD2Q15796 467 aaKnown RBP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 NBPF20Q3BBV1 942 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 BRDTQ58F21 947 aaPredicted RBP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 EEPD1Q7L9B9 569 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 PDGFCQ9NRA1 345 aa13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
PTP4A1-207ENST00000639568 MYH1P12882 1939 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 ABHD14A-ACY1A0A1B0GW23 586 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 EFCAB14O75071 495 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 KIAA1211Q6ZU35 1233 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 MRS2Q9HD23 443 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 INSL6Q9Y581 213 aa13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
PTP4A1-207ENST00000639568 CDK5RAP2Q96SN8 1893 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 H0Y858 1186 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 STXBP3O00186 592 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 CDK8P49336 464 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 IKBKEQ14164 716 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 CLUL1Q15846 466 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 FBXO16Q8IX29 292 aaPredicted RBP13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 AFAP1L1Q8TED9 768 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
PTP4A1-207ENST00000639568 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms