RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 SMPD1P17405 629 aa12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 STRBPQ96SI9 672 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 RNF146Q9NTX7 359 aa12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 SLC4A7Q9Y6M7 1214 aa12.55□□□□□ -0.4
SPTAN1-220ENST00000630147 COL4A4P53420 1690 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 EPOPA6NHQ4 379 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 ATP2A1O14983 1001 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 CA3P07451 260 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 ALAS1P13196 640 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 TDO2P48775 406 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 SLFN13Q68D06 897 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 AP5M1Q9H0R1 490 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 TRMT13Q9NUP7 481 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
SPTAN1-220ENST00000630147 M0R2C6 588 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 HMMRO75330 724 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 ARHGEF15O94989 841 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 APPP05067 770 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 BMP3P12645 472 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 BMP1P13497 986 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 ZSCAN25Q6NSZ9 544 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-220ENST00000630147 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
SPTAN1-220ENST00000630147 TRANK1O15050 2925 aa12.52□□□□□ -0.4
SPTAN1-220ENST00000630147 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 GPAA1O43292 621 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 RAB11FIP3O75154 756 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 SBK1Q52WX2 424 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 SLC43A3Q8NBI5 491 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 TRERF1Q96PN7 1200 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 ZNF536O15090 1300 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 TANC1Q9C0D5 1861 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 TET1Q8NFU7 2136 aa12.52□□□□□ -0.41
SPTAN1-220ENST00000630147 BRWD1Q9NSI6 2320 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TTLL1O95922 423 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 MYL3P08590 195 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TSPY3P0CV98 308 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TSPY8P0CW00 308 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 MCCP23508 829 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 STAT2P52630 851 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TAPT1Q6NXT6 567 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TMCO2Q7Z6W1 182 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 PCDHA11Q9Y5I1 949 aa12.51□□□□□ -0.41
SPTAN1-220ENST00000630147 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 ASB14A6NK59 587 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 NMT2O60551 498 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 CABYRO75952 493 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 OAZ1P54368 228 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 KHSRPQ92945 711 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 SEC62Q99442 399 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 INCENPQ9NQS7 918 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 MTCH2Q9Y6C9 303 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 TNKSO95271 1327 aa12.5□□□□□ -0.41
SPTAN1-220ENST00000630147 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 ZEB2O60315 1214 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 SLC1A4P43007 532 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 NKX3-2P78367 333 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 TFAP4Q01664 338 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 TMEM67Q5HYA8 995 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 IFNL3Q8IZI9 196 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 APPBP2Q92624 585 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 MKL1Q969V6 931 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 LRRCC1Q9C099 1032 aa12.49□□□□□ -0.41
SPTAN1-220ENST00000630147 ZBTB40Q9NUA8 1239 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms