RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 ANKLE1Q8NAG6 615 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 RBM28Q9NW13 759 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
SNRPA1-216ENST00000626000 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 ASB14A6NK59 587 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 ZBTB5O15062 677 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 SGPL1O95470 568 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 IGHA2P01877 340 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 MTFR1Q15390 333 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 CCL14Q16627 93 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 MTMR8Q96EF0 704 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 RIOX1Q9H6W3 641 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 JMJD4Q9H9V9 463 aa16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-216ENST00000626000 ZBTB43O43298 467 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 PGK2P07205 417 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 APOA5Q6Q788 366 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 TEX2Q8IWB9 1127 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 CYP46A1Q9Y6A2 500 aa16.25■□□□□ 0.19
SNRPA1-216ENST00000626000 PNMA6FA0A0J9YX94 578 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 CASTP20810 708 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 QRICH1Q2TAL8 776 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 NSMFQ6X4W1 530 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 RUFY3Q7L099 469 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 FAM133AQ8N9E0 248 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 DEFB118Q96PH6 123 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 CRISPLD2Q9H0B8 497 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 CENPFP49454 3210 aa16.24■□□□□ 0.19
SNRPA1-216ENST00000626000 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 SEPT4O43236 478 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 CYBAP13498 195 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 CYP2C19P33261 490 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 SNAP25P60880 206 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 USH1GQ495M9 461 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 ABHD16BQ9H3Z7 469 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 SENP2Q9HC62 589 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 VAT1LQ9HCJ6 419 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 FLRT1Q9NZU1 646 aa16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-216ENST00000626000 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 CNGA1P29973 690 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 RTN1Q16799 776 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 MUM1L1Q5H9M0 696 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 IL27Q8NEV9 243 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 CLEC4DQ8WXI8 215 aa16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 DDX20Q9UHI6 824 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-216ENST00000626000 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 NFIBO00712 420 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 AKR1A1P14550 325 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 GHRHRQ02643 423 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 TRIM32Q13049 653 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 Q6ZUG5 572 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 HOMER1Q86YM7 354 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 OGDHLQ9ULD0 1010 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 NID2Q14112 1375 aa16.21■□□□□ 0.19
SNRPA1-216ENST00000626000 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 hCG_1984214I3L0E3 225 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 EN2P19622 333 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 EVCP57679 992 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 BAATQ14032 418 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 TMTC3Q6ZXV5 915 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 ZNF713Q8N859 430 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 ARRDC4Q8NCT1 418 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 BRF1Q92994 677 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 IL17RAQ96F46 866 aa16.2■□□□□ 0.18
SNRPA1-216ENST00000626000 PIGSQ96S52 555 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms