RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ZBED3Q96IU2 234 aaPredicted RBP22.29■■□□□ 1.16
TREX1-205ENST00000625293 TAF1DQ9H5J8 278 aaPredicted RBP22.29■■□□□ 1.16
TREX1-205ENST00000625293 RIC8AQ9NPQ8 531 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 TMEM260Q9NX78 707 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 NRBP1Q9UHY1 535 aa22.29■■□□□ 1.16
TREX1-205ENST00000625293 CLRN2A0PK11 232 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 TCP10L2B9ZVM9 353 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 CLK2P49760 499 aaKnown RBP22.28■■□□□ 1.16
TREX1-205ENST00000625293 TPM4P67936 248 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 JAKMIP3Q5VZ66 844 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 OGFOD1Q8N543 542 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 SYNPO2Q9UMS6 1093 aa22.28■■□□□ 1.16
TREX1-205ENST00000625293 EDIL3O43854 480 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 GH2P01242 217 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 SLC1A4P43007 532 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 AFMP43652 599 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 LETM2Q2VYF4 491 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 DRC7Q8IY82 874 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 GMCL1Q96IK5 515 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 MTRQ99707 1265 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 CCNT1O60563 726 aaKnown RBP22.27■■□□□ 1.16
TREX1-205ENST00000625293 OR52Z1P0C646 297 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 C1QTNF8P60827 252 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 TNIP1Q15025 636 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 RBM26Q5T8P6 1007 aaKnown RBP22.27■■□□□ 1.16
TREX1-205ENST00000625293 CCSER1Q9C0I3 900 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 DACH1Q9UI36 760 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 HACL1Q9UJ83 578 aa22.27■■□□□ 1.16
TREX1-205ENST00000625293 F5H6K3 240 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 MYO1BO43795 1136 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 NEMFO60524 1076 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 TOMM70O94826 608 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 EPHX2P34913 555 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 KLRC3Q07444 240 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 CT47A1Q5JQC4 288 aaPredicted RBP22.26■■□□□ 1.15
TREX1-205ENST00000625293 GSDMAQ96QA5 445 aa22.26■■□□□ 1.15
TREX1-205ENST00000625293 NDUFB10O96000 172 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 TXLNAP40222 546 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 EAPPQ56P03 285 aaPredicted RBP22.25■■□□□ 1.15
TREX1-205ENST00000625293 AK8Q96MA6 479 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.25■■□□□ 1.15
TREX1-205ENST00000625293 DISC1Q9NRI5 854 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 OFD1O75665 1012 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 CASP1P29466 404 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 LMOD1P29536 600 aaPredicted RBP22.25■■□□□ 1.15
TREX1-205ENST00000625293 CDC25AP30304 524 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 FMR1Q06787 632 aaKnown RBP eCLIP22.25■■□□□ 1.15
TREX1-205ENST00000625293 QRICH1Q2TAL8 776 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 NAALADL2Q58DX5 795 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 ENOX1Q8TC92 643 aaKnown RBP22.25■■□□□ 1.15
TREX1-205ENST00000625293 MED15Q96RN5 788 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 GPRC5DQ9NZD1 345 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 PGAP2Q9UHJ9 254 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 PYCARDQ9ULZ3 195 aa22.25■■□□□ 1.15
TREX1-205ENST00000625293 A0A1W2PRG0 241 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 IQCA1LA6NCM1 817 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 GTPBP6O43824 516 aaPredicted RBP22.24■■□□□ 1.15
TREX1-205ENST00000625293 ATP1A3P13637 1013 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 FANCCQ00597 558 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 KARSQ15046 597 aaKnown RBP22.24■■□□□ 1.15
TREX1-205ENST00000625293 FAM83AQ86UY5 434 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 KIAA1524Q8TCG1 905 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 XPO4Q9C0E2 1151 aaKnown RBP22.24■■□□□ 1.15
TREX1-205ENST00000625293 IFNKQ9P0W0 207 aa22.24■■□□□ 1.15
TREX1-205ENST00000625293 CNOT7Q9UIV1 285 aaKnown RBP22.24■■□□□ 1.15
TREX1-205ENST00000625293 PP2D1A8MPX8 630 aa22.23■■□□□ 1.15
TREX1-205ENST00000625293 EGFRP00533 1210 aa22.23■■□□□ 1.15
TREX1-205ENST00000625293 ERCC5P28715 1186 aaPredicted RBP22.23■■□□□ 1.15
TREX1-205ENST00000625293 CUL5Q93034 780 aa22.23■■□□□ 1.15
TREX1-205ENST00000625293 MTMR9Q96QG7 549 aa22.23■■□□□ 1.15
TREX1-205ENST00000625293 TBC1D12O60347 775 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 MRPL12P52815 198 aaKnown RBP22.22■■□□□ 1.15
TREX1-205ENST00000625293 CDC37Q16543 378 aaPredicted RBP22.22■■□□□ 1.15
TREX1-205ENST00000625293 UBE2SQ16763 222 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 BTNL9Q6UXG8 535 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 SPTLC3Q9NUV7 552 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 FANCLQ9NW38 375 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 SAMD7Q7Z3H4 446 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 MICALL2Q8IY33 904 aa22.22■■□□□ 1.15
TREX1-205ENST00000625293 CACTINQ8WUQ7 758 aaKnown RBP22.22■■□□□ 1.15
TREX1-205ENST00000625293 CEP350Q5VT06 3117 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 ZNF18P17022 549 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 UBA7P41226 1012 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 STAT6P42226 847 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 HIRAP54198 1017 aaPredicted RBP22.21■■□□□ 1.15
TREX1-205ENST00000625293 CUL4BQ13620 913 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 CDAN1Q8IWY9 1227 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 IGSF22Q8N9C0 903 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 LRRC15Q8TF66 581 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 STAMQ92783 540 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 NUP88Q99567 741 aaPredicted RBP22.21■■□□□ 1.15
TREX1-205ENST00000625293 GLT8D2Q9H1C3 349 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 SCN4AP35499 1836 aa22.21■■□□□ 1.15
TREX1-205ENST00000625293 WNT10BO00744 389 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 BMP3P12645 472 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 CD44P16070 742 aaKnown RBP22.2■■□□□ 1.14
TREX1-205ENST00000625293 MAP3K10Q02779 954 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 LRMPQ12912 555 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms