RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 EEF2P13639 858 aaKnown RBP22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 SEMA3FQ13275 785 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 E4F1Q66K89 784 aaPredicted RBP22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 SPECC1LQ69YQ0 1117 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 KCTD1Q719H9 257 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 CABP7Q86V35 215 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 TTLL6Q8N841 843 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 TRIM34Q9BYJ4 488 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 RWDD2AQ9UIY3 292 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 CTNND2Q9UQB3 1225 aa22.24■■□□□ 1.15
PCDHB11-202ENST00000624887 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 PPIP5K2O43314 1243 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 SLC16A2P36021 539 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 KCNB1Q14721 858 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 DCAF4Q8WV16 495 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 MTMR9Q96QG7 549 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 TRMT1Q9NXH9 659 aaKnown RBP22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 ATRNL1Q5VV63 1379 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 C21orf2O43822 256 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 ENTPD3O75355 529 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 KCNA3P22001 575 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 CLK2P49760 499 aaKnown RBP22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 PTPN14Q15678 1187 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 IGSF22Q8N9C0 903 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 CTAGE1Q96RT6 745 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 MTFR1LQ9H019 292 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 TDRD3Q9H7E2 651 aaKnown RBP22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 PAXBP1Q9Y5B6 917 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 PSME4Q14997 1843 aa22.23■■□□□ 1.15
PCDHB11-202ENST00000624887 EDIL3O43854 480 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 DPEP1P16444 411 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 PAK1Q13153 545 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 PTPN21Q16825 1174 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 TMEM179Q6ZVK1 233 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 LRRC15Q8TF66 581 aa22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 COL2A1P02458 1487 aaPredicted RBP22.22■■□□□ 1.15
PCDHB11-202ENST00000624887 RIOK3O14730 519 aaKnown RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 PLCG1P19174 1290 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 TECP42680 631 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 SHROOM1Q2M3G4 852 aaPredicted RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 CEP135Q66GS9 1140 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 CUL5Q93034 780 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 KLRC4O43908 158 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 SLC1A4P43007 532 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 MRPL12P52815 198 aaKnown RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 CALCRLQ16602 461 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 SIAH1Q8IUQ4 282 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 PLIN2Q99541 437 aa22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 ADD3Q9UEY8 706 aaKnown RBP22.21■■□□□ 1.15
PCDHB11-202ENST00000624887 POLD1P28340 1107 aa22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 FXR2P51116 673 aaKnown RBP eCLIP22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 SEPT2Q15019 361 aa22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 SLFN13Q68D06 897 aa22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 NELFBQ8WX92 580 aa22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 MMTAG2Q9BU76 263 aaKnown RBP22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 GDAQ9Y2T3 454 aa22.2■■□□□ 1.14
PCDHB11-202ENST00000624887 RHOBTB3O94955 611 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 PRCPP42785 496 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 ICA1Q05084 483 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 KMT5BQ4FZB7 885 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 PPP4R3AQ6IN85 833 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 KIF13BQ9NQT8 1826 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 KIF2AO00139 706 aaPredicted RBP22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 SLC37A4O43826 429 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 TDP2O95551 362 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 TXKP42681 527 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 R3HDM1Q15032 1099 aaKnown RBP22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 UBE2SQ16763 222 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 ABCB5Q2M3G0 1257 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 TMEM139Q8IV31 216 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 ADSSL1Q8N142 457 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 PPP1R13BQ96KQ4 1090 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 GLT8D2Q9H1C3 349 aa22.19■■□□□ 1.14
PCDHB11-202ENST00000624887 LRRC10BA6NIK2 292 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 TNNI2P48788 182 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 TGFB2P61812 414 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 FILIP1LQ4L180 1135 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 CCDC93Q567U6 631 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 RTKN2Q8IZC4 609 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 TC2NQ8N9U0 490 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 UPF1Q92900 1129 aaKnown RBP eCLIP22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 PSTPIP2Q9H939 334 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 ARFGEF1Q9Y6D6 1849 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 TEX33O43247 280 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 PBX1P40424 430 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 SPAG1Q07617 926 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 GOLGA8FQ08AF8 430 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 GOLGA8DPQ0D2H9 430 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 QRICH1Q2TAL8 776 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 GMCL1P1Q8NEA9 526 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 CALML4Q96GE6 196 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 PSMD1Q99460 953 aa22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 LIMA1Q9UHB6 759 aaKnown RBP22.18■■□□□ 1.14
PCDHB11-202ENST00000624887 CCP110O43303 1012 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms