RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CAVIN2O95810 425 aa24.36■■□□□ 1.49
SPAST-204ENST00000621856 LONP1P36776 959 aaKnown RBP24.36■■□□□ 1.49
SPAST-204ENST00000621856 ORC2Q13416 577 aaPredicted RBP24.36■■□□□ 1.49
SPAST-204ENST00000621856 FEM1BQ9UK73 627 aa24.36■■□□□ 1.49
SPAST-204ENST00000621856 OR52Z1P0C646 297 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 DHX58Q96C10 678 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 WRNIP1Q96S55 665 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 CBX8Q9HC52 389 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 PLA2G6O60733 806 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 PRPHP41219 470 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 ZNF165P49910 485 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 TRAF1Q13077 416 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 PNOCQ13519 176 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 SAMD1Q6SPF0 538 aaPredicted RBP24.35■■□□□ 1.49
SPAST-204ENST00000621856 ELOA2Q8IYF1 753 aaPredicted RBP24.35■■□□□ 1.49
SPAST-204ENST00000621856 SCYL3Q8IZE3 742 aa24.35■■□□□ 1.49
SPAST-204ENST00000621856 POLR2AP24928 1970 aaKnown RBP24.34■■□□□ 1.49
SPAST-204ENST00000621856 A0A087WWV3 80 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L15C9J2P7 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L13C9JLJ4 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L11C9JVI0 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L18D6R9N7 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L22D6RA61 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L17D6RBQ6 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L19D6RCP7 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L20D6RJB6 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 TXLNAP40222 546 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L24Q0WX57 530 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 KANK3Q6NY19 840 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 USP17L6PQ6QN14 398 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 CCDC34Q96HJ3 373 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 PICK1Q9NRD5 415 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 ZNF112Q9UJU3 913 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 PITPNM2Q9BZ72 1349 aa24.34■■□□□ 1.49
SPAST-204ENST00000621856 ACTN4O43707 911 aaKnown RBP24.33■■□□□ 1.49
SPAST-204ENST00000621856 SUPT20HL1Q3ZLR7 823 aa24.33■■□□□ 1.49
SPAST-204ENST00000621856 CCDC174Q6PII3 467 aa24.33■■□□□ 1.49
SPAST-204ENST00000621856 C11orf57Q6ZUT1 292 aaPredicted RBP24.33■■□□□ 1.49
SPAST-204ENST00000621856 LPAR1Q92633 364 aa24.33■■□□□ 1.49
SPAST-204ENST00000621856 A0A087X0B3 334 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 BIN1O00499 593 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 WDR46O15213 610 aaKnown RBP24.32■■□□□ 1.48
SPAST-204ENST00000621856 LUZP1Q86V48 1076 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 CEP57L1Q8IYX8 460 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 PPP1R9BQ96SB3 815 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 PYM1Q9BRP8 204 aaKnown RBP24.32■■□□□ 1.48
SPAST-204ENST00000621856 RANBP17Q9H2T7 1088 aaKnown RBP24.32■■□□□ 1.48
SPAST-204ENST00000621856 MYH7BA7E2Y1 1941 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 TAL1P17542 331 aaPredicted RBP24.32■■□□□ 1.48
SPAST-204ENST00000621856 NLRP12P59046 1061 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 POSTNQ15063 836 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 MCTP2Q6DN12 878 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 FBXO28Q9NVF7 368 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 USP25Q9UHP3 1055 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 TUBE1Q9UJT0 475 aa24.32■■□□□ 1.48
SPAST-204ENST00000621856 FOXN1O15353 648 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 TDP2O95551 362 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 AP3B2Q13367 1082 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 DPY19L2Q6NUT2 758 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 POTEDQ86YR6 584 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 ZKSCAN4Q969J2 545 aaPredicted RBP24.31■■□□□ 1.48
SPAST-204ENST00000621856 DCPSQ96C86 337 aaKnown RBP24.31■■□□□ 1.48
SPAST-204ENST00000621856 ANO3Q9BYT9 981 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 NAT10Q9H0A0 1025 aaKnown RBP24.31■■□□□ 1.48
SPAST-204ENST00000621856 AS3MTQ9HBK9 375 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 FZD1Q9UP38 647 aa24.31■■□□□ 1.48
SPAST-204ENST00000621856 MTMR2Q13614 643 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 CALCRLQ16602 461 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 NAP1L4Q99733 375 aaKnown RBP24.3■■□□□ 1.48
SPAST-204ENST00000621856 MEIS2O14770 477 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 SLFN14P0C7P3 912 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 USP14P54578 494 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 MDM2Q00987 491 aaPredicted RBP24.3■■□□□ 1.48
SPAST-204ENST00000621856 GPR162Q16538 588 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 IQUBQ8NA54 791 aa24.3■■□□□ 1.48
SPAST-204ENST00000621856 SSC5DA1L4H1 1573 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 PLCB2Q00722 1185 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 SPP2Q13103 211 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 GRAMD1CQ8IYS0 662 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 WDR18Q9BV38 432 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 PCDHA5Q9Y5H7 936 aa24.29■■□□□ 1.48
SPAST-204ENST00000621856 SLC37A4O43826 429 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 EDIL3O43854 480 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 PRR29P0C7W0 189 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 GCFC2P16383 781 aaKnown RBP24.28■■□□□ 1.48
SPAST-204ENST00000621856 PTPRAP18433 802 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 UBA7P41226 1012 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 DPCR1Q3MIW9 517 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 ISM2Q6H9L7 571 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 PPP4R3AQ6IN85 833 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 SULF1Q8IWU6 871 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 RASSF8Q8NHQ8 419 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 KLRG1Q96E93 195 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 SLF1Q9BQI6 1058 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 TANGO6Q9C0B7 1094 aa24.28■■□□□ 1.48
SPAST-204ENST00000621856 SPDYE3A6NKU9 549 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 FOSP01100 380 aaPredicted RBP24.27■■□□□ 1.48
SPAST-204ENST00000621856 CDC25AP30304 524 aa24.27■■□□□ 1.48
SPAST-204ENST00000621856 DGKZQ13574 1117 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms