RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 MYOZ2Q9NPC6 264 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 M0R2N6 131 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 LONP1P36776 959 aaKnown RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 MRPL12P52815 198 aaKnown RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 STX17P56962 302 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 MYL5Q02045 173 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 TBC1D10BQ4KMP7 808 aaPredicted RBP11.24□□□□□ -0.61
VTA1-205ENST00000620996 RRAGBQ5VZM2 374 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 USP17L6PQ6QN14 398 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 PLA2G4DQ86XP0 818 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 ACER1Q8TDN7 264 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 FEZ1Q99689 392 aa11.24□□□□□ -0.61
VTA1-205ENST00000620996 COBLO75128 1261 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 TDP2O95551 362 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 BMP3P12645 472 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 TNIP1Q15025 636 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 GMLQ99445 158 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
VTA1-205ENST00000620996 NFKBIEO00221 500 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 WNT10BO00744 389 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 ATP1A3P13637 1013 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
VTA1-205ENST00000620996 CALCRLQ16602 461 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
VTA1-205ENST00000620996 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
VTA1-205ENST00000620996 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 CCDC174Q6PII3 467 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
VTA1-205ENST00000620996 XPO4Q9C0E2 1151 aaKnown RBP11.22□□□□□ -0.61
VTA1-205ENST00000620996 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
VTA1-205ENST00000620996 EGFRP00533 1210 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 BMP6P22004 513 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 LRMPQ12912 555 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
VTA1-205ENST00000620996 SYDE2Q5VT97 1194 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 TMC6Q7Z403 805 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 C4orf32Q8N8J7 132 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 CUL4BQ13620 913 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 FAM83BQ5T0W9 1011 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 CABP7Q86V35 215 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 TSC1Q92574 1164 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 GJA10Q969M2 543 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 RIC8AQ9NPQ8 531 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 MAPK8IP1Q9UQF2 711 aa11.22□□□□□ -0.61
VTA1-205ENST00000620996 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
VTA1-205ENST00000620996 ZSCAN20P17040 1043 aaPredicted RBP11.21□□□□□ -0.61
VTA1-205ENST00000620996 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
VTA1-205ENST00000620996 FANCCQ00597 558 aa11.21□□□□□ -0.61
VTA1-205ENST00000620996 RASA3Q14644 834 aa11.21□□□□□ -0.61
VTA1-205ENST00000620996 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.61
VTA1-205ENST00000620996 CNTNAP1P78357 1384 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 ESYT2A0FGR8 921 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 SLC37A4O43826 429 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 TPM3P06753 285 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 TMEM266Q2M3C6 531 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 FBXO11Q86XK2 927 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 MKL1Q969V6 931 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 MAP7D2Q96T17 732 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 GOPCQ9HD26 462 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 DISC1Q9NRI5 854 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.62
VTA1-205ENST00000620996 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
VTA1-205ENST00000620996 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 SARM1Q6SZW1 724 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 MLKLQ8NB16 471 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 KCNF1Q9H3M0 494 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 MYH4Q9Y623 1939 aa11.2□□□□□ -0.62
VTA1-205ENST00000620996 ASTN2O75129 1339 aaPredicted RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
VTA1-205ENST00000620996 UBASH3AP57075 661 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms