RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ANAPC15P60006 121 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 FUT2Q10981 343 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 PRPF38BQ5VTL8 546 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 APOA5Q6Q788 366 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 BLOC1S2Q6QNY1 142 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CLEC17AQ6ZS10 378 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 RUFY3Q7L099 469 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 GPR142Q7Z601 462 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 IFNLR1Q8IU57 520 aaPredicted RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CCDC144CPQ8IYA2 1237 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CMTR1Q8N1G2 835 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 TMTC2Q8N394 836 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 FBXL16Q8N461 479 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 BRF1Q92994 677 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 AGBL1Q96MI9 1066 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 MPHOSPH6Q99547 160 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CRISPLD2Q9H0B8 497 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 RNF208Q9H0X6 261 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 RANBP17Q9H2T7 1088 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 RAVER2Q9HCJ3 691 aaKnown RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 BIN2Q9UBW5 565 aaPredicted RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 GABRQQ9UN88 632 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 CTDP1Q9Y5B0 961 aaPredicted RBP6.1□□□□□ -1.43
SHMT1-211ENST00000618902 PLXNB2O15031 1838 aa6.1□□□□□ -1.43
SHMT1-211ENST00000618902 ZNF236Q9UL36 1845 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 PFASO15067 1338 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 SYNGAP1Q96PV0 1343 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 KLF18A0A0U1RQI7 1052 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 hCG_1642624A0A1W2PR95 340 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 PPFIA3O75145 1194 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 DDAH1O94760 285 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 CD2BP2O95400 341 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 IGHA2P01877 340 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 HMGB1P09429 215 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 PARP1P09874 1014 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 ERCC3P19447 782 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 PSMA5P28066 241 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 MRE11P49959 708 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 EVCP57679 992 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 ST3GAL1Q11201 340 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 KCTD2Q14681 263 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 ASPRV1Q53RT3 343 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 MUM1L1Q5H9M0 696 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 CCDC174Q6PII3 467 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 DPP9Q86TI2 863 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 MICU3Q86XE3 530 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 ADGRF4Q8IZF3 695 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 SRBD1Q8N5C6 995 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 RGS22Q8NE09 1264 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 CLEC4DQ8WXI8 215 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 SHISA4Q96DD7 197 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 FGD4Q96M96 766 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 MAP3K14Q99558 947 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 RIOX1Q9H6W3 641 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 VAT1LQ9HCJ6 419 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 MAP3K20Q9NYL2 800 aaKnown RBP6.09□□□□□ -1.43
SHMT1-211ENST00000618902 TPCN1Q9ULQ1 816 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 CYP46A1Q9Y6A2 500 aa6.09□□□□□ -1.43
SHMT1-211ENST00000618902 NID2Q14112 1375 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CNTNAP5Q8WYK1 1306 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 ZNFX1Q9P2E3 1918 aaKnown RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 A0A1W2PPC1 479 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 ERICH2A1L162 156 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CCDC69A6NI79 296 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 KLRF2D3W0D1 207 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 NFIBO00712 420 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 OPLAHO14841 1288 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 ADAMTS3O15072 1205 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 ZBTB43O43298 467 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 COBLO75128 1261 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 INHAP05111 366 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CCL5P13501 91 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 PDIA4P13667 645 aaKnown RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 SMARCA1P28370 1054 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 PDIA3P30101 505 aaKnown RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 MCM4P33991 863 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 ADD1P35611 737 aaKnown RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 MCM2P49736 904 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 AK2P54819 239 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 NUCB2P80303 420 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 TRIM32Q13049 653 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 IKQ13123 557 aaPredicted RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 PLS1Q14651 629 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 NTRK3Q16288 839 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CDC37Q16543 378 aaPredicted RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 QRICH1Q2TAL8 776 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 SNRNP48Q6IEG0 339 aaKnown RBP6.08□□□□□ -1.44
SHMT1-211ENST00000618902 MAMDC4Q6UXC1 1216 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 NFXL1Q6ZNB6 911 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 TMTC3Q6ZXV5 915 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 NECAB2Q7Z6G3 386 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 UBE2Q1Q7Z7E8 422 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CATIPQ7Z7H3 387 aa6.08□□□□□ -1.44
SHMT1-211ENST00000618902 CPXCR1Q8N123 301 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms