RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 SGSM2O43147 1006 aa29.51■■■□□ 2.31
VEGFA-228ENST00000617771 GOLGA8HP0CJ92 632 aa29.51■■■□□ 2.31
VEGFA-228ENST00000617771 ASPRV1Q53RT3 343 aa29.51■■■□□ 2.31
VEGFA-228ENST00000617771 UBE2OQ9C0C9 1292 aaKnown RBP29.51■■■□□ 2.31
VEGFA-228ENST00000617771 KATNBL1Q9H079 304 aa29.51■■■□□ 2.31
VEGFA-228ENST00000617771 NFIBO00712 420 aa29.5■■■□□ 2.31
VEGFA-228ENST00000617771 PTH1RQ03431 593 aa29.5■■■□□ 2.31
VEGFA-228ENST00000617771 TRIM60Q495X7 471 aa29.5■■■□□ 2.31
VEGFA-228ENST00000617771 IFIT1BQ5T764 474 aaKnown RBP29.5■■■□□ 2.31
VEGFA-228ENST00000617771 KLHDC9Q8NEP7 349 aa29.5■■■□□ 2.31
VEGFA-228ENST00000617771 LBHD1Q9BQE6 289 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-228ENST00000617771 ADD3Q9UEY8 706 aaKnown RBP29.5■■■□□ 2.31
VEGFA-228ENST00000617771 A0A1W2PQ45 241 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-228ENST00000617771 A0A1W2PQY0 241 aa29.49■■■□□ 2.31
VEGFA-228ENST00000617771 MOXD2PA6NHM9 499 aa29.49■■■□□ 2.31
VEGFA-228ENST00000617771 BAATQ14032 418 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-228ENST00000617771 NUP133Q8WUM0 1156 aa29.49■■■□□ 2.31
VEGFA-228ENST00000617771 UBA5Q9GZZ9 404 aa29.49■■■□□ 2.31
VEGFA-228ENST00000617771 ASTN1O14525 1302 aa29.48■■■□□ 2.31
VEGFA-228ENST00000617771 PTPDC1A2A3K4 754 aa29.48■■■□□ 2.31
VEGFA-228ENST00000617771 CYP21A2P08686 494 aa29.48■■■□□ 2.31
VEGFA-228ENST00000617771 C6orf222P0C671 652 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-228ENST00000617771 CST5P28325 142 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-228ENST00000617771 ACLYP53396 1101 aa29.48■■■□□ 2.31
VEGFA-228ENST00000617771 MDM2Q00987 491 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-228ENST00000617771 UPF3AQ9H1J1 476 aaKnown RBP29.48■■■□□ 2.31
VEGFA-228ENST00000617771 TRIOBPQ9H2D6 2365 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 LOC102724159A0A0B4J2E5 919 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 ADCY6O43306 1168 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 PARP1P09874 1014 aaKnown RBP29.47■■■□□ 2.31
VEGFA-228ENST00000617771 GJA9P57773 515 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 TNFAIP2Q03169 654 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 PWP2Q15269 919 aaKnown RBP29.47■■■□□ 2.31
VEGFA-228ENST00000617771 KCNA10Q16322 511 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 PCSK9Q8NBP7 692 aaKnown RBP29.47■■■□□ 2.31
VEGFA-228ENST00000617771 CLEC4DQ8WXI8 215 aa29.47■■■□□ 2.31
VEGFA-228ENST00000617771 PRDM5Q9NQX1 630 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-228ENST00000617771 RANBP2P49792 3224 aaKnown RBP29.47■■■□□ 2.31
VEGFA-228ENST00000617771 MCM3APO60318 1980 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 CCSAPQ6IQ19 270 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-228ENST00000617771 RNF207Q6ZRF8 634 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 NOL8Q76FK4 1167 aaKnown RBP29.46■■■□□ 2.31
VEGFA-228ENST00000617771 RALYLQ86SE5 291 aaKnown RBP29.46■■■□□ 2.31
VEGFA-228ENST00000617771 TDHQ8IZJ6 230 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 CPVLQ9H3G5 476 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 STARD7Q9NQZ5 370 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 DNAH12Q6ZR08 3092 aa29.46■■■□□ 2.31
VEGFA-228ENST00000617771 MYADML2A6NDP7 307 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 ALDH5A1P51649 535 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-228ENST00000617771 SEC23AQ15436 765 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 CDC37Q16543 378 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-228ENST00000617771 USH1GQ495M9 461 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 CYB5R4Q7L1T6 521 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 CENPQQ7L2Z9 268 aaPredicted RBP29.45■■■□□ 2.31
VEGFA-228ENST00000617771 ADGRF4Q8IZF3 695 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 MORC4Q8TE76 937 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 PURBQ96QR8 312 aaKnown RBP29.45■■■□□ 2.31
VEGFA-228ENST00000617771 VTA1Q9NP79 307 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 PCDH10Q9P2E7 1040 aa29.45■■■□□ 2.31
VEGFA-228ENST00000617771 CALML3P27482 149 aa29.44■■■□□ 2.3
VEGFA-228ENST00000617771 TLE2Q04725 743 aa29.44■■■□□ 2.3
VEGFA-228ENST00000617771 SLC30A10Q6XR72 485 aa29.44■■■□□ 2.3
VEGFA-228ENST00000617771 FBXO16Q8IX29 292 aaPredicted RBP29.44■■■□□ 2.3
VEGFA-228ENST00000617771 GLT1D1Q96MS3 346 aa29.44■■■□□ 2.3
VEGFA-228ENST00000617771 MPHOSPH6Q99547 160 aaKnown RBP29.44■■■□□ 2.3
VEGFA-228ENST00000617771 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.43■■■□□ 2.3
VEGFA-228ENST00000617771 ERICH2A1L162 156 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 DHX16O60231 1041 aaKnown RBP29.43■■■□□ 2.3
VEGFA-228ENST00000617771 GNASQ5JWF2 1037 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 IQSEC1Q6DN90 963 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 KIAA1211Q6ZU35 1233 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 EEPD1Q7L9B9 569 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 NCOA7Q8NI08 942 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 MAP4K1Q92918 833 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 PDLIM7Q9NR12 457 aa29.43■■■□□ 2.3
VEGFA-228ENST00000617771 E7EWF7 191 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 ASGR1P07306 291 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 RPS6P62753 249 aaKnown RBP29.42■■■□□ 2.3
VEGFA-228ENST00000617771 NKX3-2P78367 333 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 RGS22Q8NE09 1264 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 MAF1Q9H063 256 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 GNEQ9Y223 722 aaKnown RBP29.42■■■□□ 2.3
VEGFA-228ENST00000617771 DDX49Q9Y6V7 483 aaKnown RBP29.42■■■□□ 2.3
VEGFA-228ENST00000617771 LRRC37A2A6NM11 1700 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 ABCB11O95342 1321 aa29.42■■■□□ 2.3
VEGFA-228ENST00000617771 IFIT3O14879 490 aaKnown RBP29.41■■■□□ 2.3
VEGFA-228ENST00000617771 SART3Q15020 963 aaKnown RBP29.41■■■□□ 2.3
VEGFA-228ENST00000617771 TAPT1Q6NXT6 567 aa29.41■■■□□ 2.3
VEGFA-228ENST00000617771 TLK2Q86UE8 772 aa29.41■■■□□ 2.3
VEGFA-228ENST00000617771 AP5M1Q9H0R1 490 aa29.41■■■□□ 2.3
VEGFA-228ENST00000617771 RBM8AQ9Y5S9 174 aaKnown RBP29.41■■■□□ 2.3
VEGFA-228ENST00000617771 LCTP09848 1927 aa29.41■■■□□ 2.3
VEGFA-228ENST00000617771 ELP1O95163 1332 aa29.41■■■□□ 2.3
VEGFA-228ENST00000617771 PQBP1O60828 265 aaKnown RBP29.4■■■□□ 2.3
VEGFA-228ENST00000617771 CLTBP09497 229 aa29.4■■■□□ 2.3
VEGFA-228ENST00000617771 IRX5P78411 483 aaPredicted RBP29.4■■■□□ 2.3
VEGFA-228ENST00000617771 LRIT3Q3SXY7 679 aa29.4■■■□□ 2.3
VEGFA-228ENST00000617771 DNERQ8NFT8 737 aa29.4■■■□□ 2.3
VEGFA-228ENST00000617771 PDGFCQ9NRA1 345 aa29.4■■■□□ 2.3
VEGFA-228ENST00000617771 B4DLN1 442 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms