RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 FPGSQ05932 587 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 CCDC96Q2M329 555 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 RRP12Q5JTH9 1297 aaKnown RBP20.98■□□□□ 0.95
SSBP1-215ENST00000612337 BTNL9Q6UXG8 535 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 ZNF589Q86UQ0 364 aaPredicted RBP20.98■□□□□ 0.95
SSBP1-215ENST00000612337 LNPKQ9C0E8 428 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 RANBP17Q9H2T7 1088 aaKnown RBP20.98■□□□□ 0.95
SSBP1-215ENST00000612337 CYP39A1Q9NYL5 469 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 TBX21Q9UL17 535 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 CCPG1Q9ULG6 757 aa20.98■□□□□ 0.95
SSBP1-215ENST00000612337 A0A0U1RQG5 324 aaPredicted RBP20.97■□□□□ 0.95
SSBP1-215ENST00000612337 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.97■□□□□ 0.95
SSBP1-215ENST00000612337 ICAM1P05362 532 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 TOP1P11387 765 aaKnown RBP20.97■□□□□ 0.95
SSBP1-215ENST00000612337 NMIQ13287 307 aaPredicted RBP20.97■□□□□ 0.95
SSBP1-215ENST00000612337 MUM1L1Q5H9M0 696 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 VTI1AQ96AJ9 217 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 RNPC3Q96LT9 517 aaKnown RBP20.97■□□□□ 0.95
SSBP1-215ENST00000612337 TMEM47Q9BQJ4 181 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 ASTN1O14525 1302 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 CCDC171Q6TFL3 1326 aa20.97■□□□□ 0.95
SSBP1-215ENST00000612337 PRUNE2Q8WUY3 3088 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 LRRC37A2A6NM11 1700 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 TRIM6-TRIM34B2RNG4 842 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 ARVCFO00192 962 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 TIMP1P01033 207 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 TTBK2Q6IQ55 1244 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 SEMA6BQ9H3T3 888 aa20.96■□□□□ 0.95
SSBP1-215ENST00000612337 GNEQ9Y223 722 aaKnown RBP20.96■□□□□ 0.95
SSBP1-215ENST00000612337 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
SSBP1-215ENST00000612337 SLC16A2P36021 539 aa20.95■□□□□ 0.94
SSBP1-215ENST00000612337 NSMFQ6X4W1 530 aa20.95■□□□□ 0.94
SSBP1-215ENST00000612337 NOL8Q76FK4 1167 aaKnown RBP20.95■□□□□ 0.94
SSBP1-215ENST00000612337 LCTP09848 1927 aa20.95■□□□□ 0.94
SSBP1-215ENST00000612337 VCANP13611 3396 aa20.95■□□□□ 0.94
SSBP1-215ENST00000612337 HAND2P61296 217 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 BEX3Q00994 111 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 MFSD5Q6N075 450 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 TLK2Q86UE8 772 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 MORC4Q8TE76 937 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 RILPL2Q969X0 211 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 TTC14Q96N46 770 aa20.94■□□□□ 0.94
SSBP1-215ENST00000612337 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
SSBP1-215ENST00000612337 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
SSBP1-215ENST00000612337 CABYRO75952 493 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 PDHBP11177 359 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 SMPD1P17405 629 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
SSBP1-215ENST00000612337 AKNAD1Q5T1N1 836 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 IQSEC1Q6DN90 963 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 TAPT1Q6NXT6 567 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 MFSD6Q6ZSS7 791 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 FAM126BQ8IXS8 530 aa20.93■□□□□ 0.94
SSBP1-215ENST00000612337 CDX2Q99626 313 aaPredicted RBP20.93■□□□□ 0.94
SSBP1-215ENST00000612337 TTYH1Q9H313 450 aaPredicted RBP20.93■□□□□ 0.94
SSBP1-215ENST00000612337 FRMPD2Q68DX3 1309 aaPredicted RBP20.93■□□□□ 0.94
SSBP1-215ENST00000612337 SDSP20132 328 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 FSCN1Q16658 493 aaKnown RBP20.92■□□□□ 0.94
SSBP1-215ENST00000612337 B4GALNT3Q6L9W6 998 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 TBC1D10CQ8IV04 446 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 FBXO16Q8IX29 292 aaPredicted RBP20.92■□□□□ 0.94
SSBP1-215ENST00000612337 PURBQ96QR8 312 aaKnown RBP20.92■□□□□ 0.94
SSBP1-215ENST00000612337 AP5M1Q9H0R1 490 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 OSBPL3Q9H4L5 887 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 RNF41Q9H4P4 317 aaPredicted RBP20.92■□□□□ 0.94
SSBP1-215ENST00000612337 VTA1Q9NP79 307 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 GPCPD1Q9NPB8 672 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 PDGFCQ9NRA1 345 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 ADD3Q9UEY8 706 aaKnown RBP20.92■□□□□ 0.94
SSBP1-215ENST00000612337 PNMA2Q9UL42 364 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 Q9Y3F1 56 aa20.92■□□□□ 0.94
SSBP1-215ENST00000612337 TMEM265A0A087WTH1 108 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 LOC102724159A0A0B4J2E5 919 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 TLR3O15455 904 aaKnown RBP20.91■□□□□ 0.94
SSBP1-215ENST00000612337 DYNC1LI2O43237 492 aaPredicted RBP20.91■□□□□ 0.94
SSBP1-215ENST00000612337 ZEB2O60315 1214 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 SNHG28P0DPA3 235 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 PPIGQ13427 754 aaKnown RBP eCLIP20.91■□□□□ 0.94
SSBP1-215ENST00000612337 BAATQ14032 418 aaPredicted RBP20.91■□□□□ 0.94
SSBP1-215ENST00000612337 PWP2Q15269 919 aaKnown RBP20.91■□□□□ 0.94
SSBP1-215ENST00000612337 CXCL17Q6UXB2 119 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 EEPD1Q7L9B9 569 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 CHD1LQ86WJ1 897 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 PLEKHM2Q8IWE5 1019 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 SLC43A3Q8NBI5 491 aa20.91■□□□□ 0.94
SSBP1-215ENST00000612337 NFIBO00712 420 aa20.9■□□□□ 0.94
SSBP1-215ENST00000612337 CD4P01730 458 aa20.9■□□□□ 0.94
SSBP1-215ENST00000612337 NUCB1Q02818 461 aa20.9■□□□□ 0.94
SSBP1-215ENST00000612337 ZNF543Q08ER8 600 aa20.9■□□□□ 0.94
SSBP1-215ENST00000612337 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
SSBP1-215ENST00000612337 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.89■□□□□ 0.93
SSBP1-215ENST00000612337 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.89■□□□□ 0.93
SSBP1-215ENST00000612337 PTGS1P23219 599 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 NT5C2P49902 561 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 ALDH5A1P51649 535 aaPredicted RBP20.89■□□□□ 0.93
SSBP1-215ENST00000612337 KIAA1211Q6ZU35 1233 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 TMEM199Q8N511 208 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 CLEC4DQ8WXI8 215 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms