RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 NKX2-4Q9H2Z4 354 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 Q9Y3F1 56 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 SLC4A7Q9Y6M7 1214 aa18.77■□□□□ 0.6
HDDC2-210ENST00000609574 SPTBN5Q9NRC6 3674 aaKnown RBP18.77■□□□□ 0.6
HDDC2-210ENST00000609574 PRUNE2Q8WUY3 3088 aa18.77■□□□□ 0.59
HDDC2-210ENST00000609574 EYSQ5T1H1 3165 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 ZBBXA8MT70 800 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 ADCY6O43306 1168 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 SUPT20HL2P0C7V6 817 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 CCL23P55773 120 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 SLC43A3Q8NBI5 491 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 GMCL1Q96IK5 515 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 FGD4Q96M96 766 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 AGBL1Q96MI9 1066 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 NAPBQ9H115 298 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 A1CFQ9NQ94 594 aaKnown RBP18.76■□□□□ 0.59
HDDC2-210ENST00000609574 CDH23Q9H251 3354 aa18.76■□□□□ 0.59
HDDC2-210ENST00000609574 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.75■□□□□ 0.59
HDDC2-210ENST00000609574 MCCP23508 829 aa18.75■□□□□ 0.59
HDDC2-210ENST00000609574 AAK1Q2M2I8 961 aa18.75■□□□□ 0.59
HDDC2-210ENST00000609574 ADAMTS19Q8TE59 1207 aa18.75■□□□□ 0.59
HDDC2-210ENST00000609574 UHRF1Q96T88 793 aaPredicted RBP18.75■□□□□ 0.59
HDDC2-210ENST00000609574 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
HDDC2-210ENST00000609574 GPHNQ9NQX3 736 aaPredicted RBP18.75■□□□□ 0.59
HDDC2-210ENST00000609574 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
HDDC2-210ENST00000609574 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 SOWAHBA6NEL2 793 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 ERC2O15083 957 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 CTAGE5O15320 804 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 PLA2G6O60733 806 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
HDDC2-210ENST00000609574 PPP2R2DQ66LE6 453 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 VTA1Q9NP79 307 aa18.74■□□□□ 0.59
HDDC2-210ENST00000609574 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
HDDC2-210ENST00000609574 GNEQ9Y223 722 aaKnown RBP18.74■□□□□ 0.59
HDDC2-210ENST00000609574 TSPY2A6NKD2 308 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 PFKMP08237 780 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 SMPD1P17405 629 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 NSMFQ6X4W1 530 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 EEPD1Q7L9B9 569 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 MICALL1Q8N3F8 863 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
HDDC2-210ENST00000609574 TRPV6Q9H1D0 765 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 EPB41L4AQ9HCS5 686 aaPredicted RBP18.73■□□□□ 0.59
HDDC2-210ENST00000609574 POLR3EQ9NVU0 708 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 CXXC1Q9P0U4 656 aaPredicted RBP18.73■□□□□ 0.59
HDDC2-210ENST00000609574 CCPG1Q9ULG6 757 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 PCDHA11Q9Y5I1 949 aa18.73■□□□□ 0.59
HDDC2-210ENST00000609574 M0R2C6 588 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 GTPBP6O43824 516 aaPredicted RBP18.72■□□□□ 0.59
HDDC2-210ENST00000609574 ACTN1P12814 892 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 PPARAQ07869 468 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 ADGRE1Q14246 886 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 SKIV2LQ15477 1246 aaKnown RBP18.72■□□□□ 0.59
HDDC2-210ENST00000609574 KCTD1Q719H9 257 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 NOC4LQ9BVI4 516 aaKnown RBP18.72■□□□□ 0.59
HDDC2-210ENST00000609574 RCAN3Q9UKA8 241 aa18.72■□□□□ 0.59
HDDC2-210ENST00000609574 B4GALT4O60513 344 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 ATP2A2P16615 1042 aaKnown RBP18.71■□□□□ 0.59
HDDC2-210ENST00000609574 CPT1AP50416 773 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 FBXO16Q8IX29 292 aaPredicted RBP18.71■□□□□ 0.59
HDDC2-210ENST00000609574 MIER1Q8N108 512 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 CYP39A1Q9NYL5 469 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 ASTN1O14525 1302 aa18.71■□□□□ 0.59
HDDC2-210ENST00000609574 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 RABGGTBP53611 331 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 PSMC6P62333 389 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 TAPT1Q6NXT6 567 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 RETREG2Q8NC44 543 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 ALDH8A1Q9H2A2 487 aaPredicted RBP18.7■□□□□ 0.58
HDDC2-210ENST00000609574 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 PDGFCQ9NRA1 345 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 PNMA2Q9UL42 364 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 PRR12Q9ULL5 1215 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 MTMR7Q9Y216 660 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
HDDC2-210ENST00000609574 ZNF536O15090 1300 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 RAD50Q92878 1312 aa18.7■□□□□ 0.58
HDDC2-210ENST00000609574 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 B4DLN1 442 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
HDDC2-210ENST00000609574 MYL3P08590 195 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
HDDC2-210ENST00000609574 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
HDDC2-210ENST00000609574 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 TSHZ3Q63HK5 1081 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
HDDC2-210ENST00000609574 UMODL1Q5DID0 1318 aa18.69■□□□□ 0.58
HDDC2-210ENST00000609574 MYO9BQ13459 2157 aa18.68■□□□□ 0.58
HDDC2-210ENST00000609574 KPNA6O60684 536 aa18.68■□□□□ 0.58
HDDC2-210ENST00000609574 ICAM1P05362 532 aa18.68■□□□□ 0.58
HDDC2-210ENST00000609574 SNAP25P60880 206 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms