RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 NPLOC4Q8TAT6 608 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
SNRPA-208ENST00000600456 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
SNRPA-208ENST00000600456 PDRG1Q9NUG6 133 aa16.03■□□□□ 0.16
SNRPA-208ENST00000600456 DOCK3Q8IZD9 2030 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 NID2Q14112 1375 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 IGHA2P01877 340 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 PGK2P07205 417 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 APOBRQ0VD83 1088 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 CCL14Q16627 93 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 ZNF467Q7Z7K2 595 aaPredicted RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 MSL3Q8N5Y2 521 aaKnown RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 CLEC4DQ8WXI8 215 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 MAML3Q96JK9 1138 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 PIGSQ96S52 555 aa16.02■□□□□ 0.16
SNRPA-208ENST00000600456 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 MRPL11Q9Y3B7 192 aaKnown RBP16.02■□□□□ 0.16
SNRPA-208ENST00000600456 CCDC85CA6NKD9 419 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 PLEKHA8P1O95397 391 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 METAP2P50579 478 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRPA-208ENST00000600456 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
SNRPA-208ENST00000600456 ANKRD1Q15327 319 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 USH1GQ495M9 461 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 FLRT1Q9NZU1 646 aa16.01■□□□□ 0.15
SNRPA-208ENST00000600456 SEC63Q9UGP8 760 aaKnown RBP16.01■□□□□ 0.15
SNRPA-208ENST00000600456 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
SNRPA-208ENST00000600456 NFIBO00712 420 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
SNRPA-208ENST00000600456 RBM25P49756 843 aaKnown RBP16■□□□□ 0.15
SNRPA-208ENST00000600456 NSMFQ6X4W1 530 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 TMEM106CQ9BVX2 250 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
SNRPA-208ENST00000600456 RPTORQ8N122 1335 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 CCL5P13501 91 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 CAPN2P17655 700 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 PDIA3P30101 505 aaKnown RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 MAMDC4Q6UXC1 1216 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 RNF207Q6ZRF8 634 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 SAMD3Q8N6K7 520 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 ZNF274Q96GC6 653 aaPredicted RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
SNRPA-208ENST00000600456 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 FAM217BQ9NTX9 383 aaPredicted RBP15.99■□□□□ 0.15
SNRPA-208ENST00000600456 SYNGAP1Q96PV0 1343 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 LOC102724159A0A0B4J2E5 919 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 GHRHRQ02643 423 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 FUT2Q10981 343 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 TRIM32Q13049 653 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 BAATQ14032 418 aaPredicted RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 PWP2Q15269 919 aaKnown RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 MTFR1Q15390 333 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 CMTR1Q8N1G2 835 aaKnown RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 RNF208Q9H0X6 261 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 UNC93B1Q9H1C4 597 aa15.98■□□□□ 0.15
SNRPA-208ENST00000600456 PAK6Q9NQU5 681 aaPredicted RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 MAP3K20Q9NYL2 800 aaKnown RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 ADD3Q9UEY8 706 aaKnown RBP15.98■□□□□ 0.15
SNRPA-208ENST00000600456 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 ASB14A6NK59 587 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 GJB1P08034 283 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 CDC27P30260 824 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 CYP2C19P33261 490 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 NEK4P51957 841 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 RPS6P62753 249 aaKnown RBP15.97■□□□□ 0.15
SNRPA-208ENST00000600456 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 IL27Q8NEV9 243 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 FGD4Q96M96 766 aa15.97■□□□□ 0.15
SNRPA-208ENST00000600456 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNRPA-208ENST00000600456 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
SNRPA-208ENST00000600456 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
SNRPA-208ENST00000600456 hCG_1984214I3L0E3 225 aa15.96■□□□□ 0.15
SNRPA-208ENST00000600456 MYCP01106 439 aaPredicted RBP15.96■□□□□ 0.15
SNRPA-208ENST00000600456 CYBAP13498 195 aa15.96■□□□□ 0.15
SNRPA-208ENST00000600456 CALML3P27482 149 aa15.96■□□□□ 0.15
SNRPA-208ENST00000600456 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.15
SNRPA-208ENST00000600456 AK2P54819 239 aa15.96■□□□□ 0.15
SNRPA-208ENST00000600456 CCDC82Q8N4S0 544 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms