RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 SLC27A2O14975 620 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 RARBP10826 455 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 ACVR2BQ13705 512 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 BAATQ14032 418 aaPredicted RBP26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 COL9A3Q14050 684 aaPredicted RBP26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 C7orf61Q8IZ16 206 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 ABHD16BQ9H3Z7 469 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 DDX49Q9Y6V7 483 aaKnown RBP26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 CEP290O15078 2479 aa26.09■■□□□ 1.77
GTF2F1-204ENST00000594965 ADCY6O43306 1168 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 CDC37Q16543 378 aaPredicted RBP26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 IGDCC4Q8TDY8 1250 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 ANO2Q9NQ90 1003 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 XPNPEP3Q9NQH7 507 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 MAD2L2Q9UI95 211 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 PNMA2Q9UL42 364 aa26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 COLQQ9Y215 455 aaPredicted RBP26.08■■□□□ 1.77
GTF2F1-204ENST00000594965 PGK1P00558 417 aa26.07■■□□□ 1.76
GTF2F1-204ENST00000594965 CREB3L3Q68CJ9 461 aa26.07■■□□□ 1.76
GTF2F1-204ENST00000594965 JMJD4Q9H9V9 463 aa26.07■■□□□ 1.76
GTF2F1-204ENST00000594965 FAM184BQ9ULE4 1060 aa26.07■■□□□ 1.76
GTF2F1-204ENST00000594965 PALM3A6NDB9 673 aaPredicted RBP26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 ASB14A6NK59 587 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 ADAMTS4O75173 837 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 CDC45O75419 566 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 NEFLP07196 543 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 WTAPQ15007 396 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 SLC30A10Q6XR72 485 aa26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 BAZ2BQ9UIF8 2168 aaKnown RBP26.06■■□□□ 1.76
GTF2F1-204ENST00000594965 KBTBD13C9JR72 458 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 MYCNP04198 464 aaPredicted RBP26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 GRM4Q14833 912 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 SLC35G1Q2M3R5 365 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 QRICH1Q2TAL8 776 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 CCDC144BQ3MJ40 725 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 USH1GQ495M9 461 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 VAT1LQ9HCJ6 419 aa26.05■■□□□ 1.76
GTF2F1-204ENST00000594965 ERICH2A1L162 156 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 PTPDC1A2A3K4 754 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 TROAPQ12815 778 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 TMEM67Q5HYA8 995 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 CHRDL2Q6WN34 429 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 MORC4Q8TE76 937 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 MTMR8Q96EF0 704 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 PRO3102Q9H379 93 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 GPHNQ9NQX3 736 aaPredicted RBP26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 SYNRGQ9UMZ2 1314 aa26.04■■□□□ 1.76
GTF2F1-204ENST00000594965 KLRF2D3W0D1 207 aa26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 DUSP11O75319 330 aaKnown RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 ADCYAP1R1P41586 468 aa26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 ATN1P54259 1190 aaPredicted RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 RPS6P62753 249 aaKnown RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 SART3Q15020 963 aaKnown RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 HABP4Q5JVS0 413 aaKnown RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 RNF207Q6ZRF8 634 aa26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 LY9Q9HBG7 655 aa26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 ZMYND8Q9ULU4 1186 aaPredicted RBP26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 PHF24Q9UPV7 400 aa26.03■■□□□ 1.76
GTF2F1-204ENST00000594965 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 CALML3P27482 149 aa26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 ALDH5A1P51649 535 aaPredicted RBP26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 IRX5P78411 483 aaPredicted RBP26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 SLC39A5Q6ZMH5 540 aa26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 KLHDC9Q8NEP7 349 aa26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 TBC1D5Q92609 795 aa26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 PCDH10Q9P2E7 1040 aa26.02■■□□□ 1.76
GTF2F1-204ENST00000594965 MYADML2A6NDP7 307 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 PRC1O43663 620 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 DHX16O60231 1041 aaKnown RBP26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 ABCB11O95342 1321 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 CCSAPQ6IQ19 270 aaPredicted RBP26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 TAPT1Q6NXT6 567 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 RNF180Q86T96 592 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 RGS22Q8NE09 1264 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 FERMT2Q96AC1 680 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 MTA3Q9BTC8 594 aa26.01■■□□□ 1.75
GTF2F1-204ENST00000594965 SYN1P17600 705 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 SNX17Q15036 470 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 CASC1Q6TDU7 716 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 EEPD1Q7L9B9 569 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 FBXO16Q8IX29 292 aaPredicted RBP26■■□□□ 1.75
GTF2F1-204ENST00000594965 UPF3AQ9H1J1 476 aaKnown RBP26■■□□□ 1.75
GTF2F1-204ENST00000594965 RIOX1Q9H6W3 641 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 PDGFCQ9NRA1 345 aa26■■□□□ 1.75
GTF2F1-204ENST00000594965 RBM27Q9P2N5 1060 aaKnown RBP26■■□□□ 1.75
GTF2F1-204ENST00000594965 ADD3Q9UEY8 706 aaKnown RBP26■■□□□ 1.75
GTF2F1-204ENST00000594965 SH2B2O14492 632 aaPredicted RBP25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 CYTH3O43739 400 aa25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 PPP1R11O60927 126 aaPredicted RBP25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 MCM5P33992 734 aa25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 RTP1P59025 263 aa25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 FBXO11Q86XK2 927 aa25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 GNEQ9Y223 722 aaKnown RBP25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 LTBP2Q14767 1821 aa25.99■■□□□ 1.75
GTF2F1-204ENST00000594965 LOC102724159A0A0B4J2E5 919 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 CTAGE5O15320 804 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 GJA9P57773 515 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 PWP2Q15269 919 aaKnown RBP25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 TMEM63BQ5T3F8 832 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 CATIPQ7Z7H3 387 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms