RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 POLLQ9UGP5 575 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 RNF112Q9ULX5 631 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 ZNF521Q96K83 1311 aa9.54□□□□□ -0.88
VMP1-213ENST00000591877 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 EREGO14944 169 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 COBLO75128 1261 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
VMP1-213ENST00000591877 RAD17O75943 681 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 GJA8P48165 433 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 GRM2Q14416 872 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 NXPE4Q6UWF7 544 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 PNMA8AQ86V59 439 aaPredicted RBP9.53□□□□□ -0.88
VMP1-213ENST00000591877 GPR101Q96P66 508 aaPredicted RBP9.53□□□□□ -0.88
VMP1-213ENST00000591877 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 EFCC1Q9HA90 598 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 JPH1Q9HDC5 661 aaPredicted RBP9.53□□□□□ -0.88
VMP1-213ENST00000591877 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 PSME4Q14997 1843 aa9.53□□□□□ -0.88
VMP1-213ENST00000591877 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
VMP1-213ENST00000591877 PCNTO95613 3336 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 SHTN1A0MZ66 631 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
VMP1-213ENST00000591877 CES1P23141 567 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 GMPSP49915 693 aaPredicted RBP9.52□□□□□ -0.89
VMP1-213ENST00000591877 CASP7P55210 303 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 ARID5AQ03989 594 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 CIAPIN1Q6FI81 312 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 VPS37DQ86XT2 251 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 CNTROBQ8N137 903 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 TTLL11Q8NHH1 800 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 TBC1D16Q8TBP0 767 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 KCNQ5Q9NR82 932 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 PPM1HQ9ULR3 514 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
VMP1-213ENST00000591877 POLR2AP24928 1970 aaKnown RBP9.52□□□□□ -0.89
VMP1-213ENST00000591877 WTIPA6NIX2 430 aaPredicted RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 PAX4O43316 350 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 CTSWP56202 376 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 NEXNQ0ZGT2 675 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 GCKRQ14397 625 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 CCDC152Q4G0S7 254 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 USP50Q70EL3 339 aaPredicted RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 DMRTC2Q8IXT2 367 aaPredicted RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 DNAAF4Q8WXU2 420 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 BHMTQ93088 406 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 DBNDD1Q9H9R9 158 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 ADARB2Q9NS39 739 aaKnown RBP9.51□□□□□ -0.89
VMP1-213ENST00000591877 PCDHGB7Q9Y5F8 929 aa9.51□□□□□ -0.89
VMP1-213ENST00000591877 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 A0A1B0GUL6 1792 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 PSMD14O00487 310 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 POLR3DP05423 398 aaPredicted RBP9.5□□□□□ -0.89
VMP1-213ENST00000591877 TNNI2P48788 182 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 PWP1Q13610 501 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 TNIP1Q15025 636 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 SPATA32Q96LK8 384 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 UBE2OQ9C0C9 1292 aaKnown RBP9.5□□□□□ -0.89
VMP1-213ENST00000591877 GREM2Q9H772 168 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 PCMTD2Q9NV79 361 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 CNTNAP1P78357 1384 aa9.5□□□□□ -0.89
VMP1-213ENST00000591877 F6X3S4 739 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 TRAF5O00463 557 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 ECE2O60344 883 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 HOXD8P13378 290 aaPredicted RBP9.49□□□□□ -0.89
VMP1-213ENST00000591877 CCINQ13939 588 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 BEND3Q5T5X7 828 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 ANKRD18AQ8IVF6 992 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
VMP1-213ENST00000591877 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 TRPM4Q8TD43 1214 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 EYA3Q99504 573 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 RSRP1Q9BUV0 290 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 PLA2G12BQ9BX93 195 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 MYH16Q9H6N6 1097 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 PGAP2Q9UHJ9 254 aa9.49□□□□□ -0.89
VMP1-213ENST00000591877 CNOT7Q9UIV1 285 aaKnown RBP9.49□□□□□ -0.89
VMP1-213ENST00000591877 A0A1W2PP55 124 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 UFL1O94874 794 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 CSF1RP07333 972 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 DNAJA1P31689 397 aaKnown RBP9.48□□□□□ -0.89
VMP1-213ENST00000591877 SOX18P35713 384 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 CST9Q5W186 159 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 C3orf58Q8NDZ4 430 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
VMP1-213ENST00000591877 BSDC1Q9NW68 430 aaPredicted RBP9.48□□□□□ -0.89
VMP1-213ENST00000591877 SLC6A14Q9UN76 642 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 MINPP1Q9UNW1 487 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms