RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NFIBO00712 420 aa23.85■■□□□ 1.41
SS18-224ENST00000584083 BAATQ14032 418 aaPredicted RBP23.85■■□□□ 1.41
SS18-224ENST00000584083 LRRC41Q15345 812 aa23.85■■□□□ 1.41
SS18-224ENST00000584083 LRRC26Q2I0M4 334 aa23.85■■□□□ 1.41
SS18-224ENST00000584083 ADGRF4Q8IZF3 695 aa23.85■■□□□ 1.41
SS18-224ENST00000584083 LENG1Q96BZ8 264 aaPredicted RBP23.85■■□□□ 1.41
SS18-224ENST00000584083 VAT1LQ9HCJ6 419 aa23.85■■□□□ 1.41
SS18-224ENST00000584083 COLQQ9Y215 455 aaPredicted RBP23.85■■□□□ 1.41
SS18-224ENST00000584083 PTPDC1A2A3K4 754 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 ASB14A6NK59 587 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 PGK1P00558 417 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 ATN1P54259 1190 aaPredicted RBP23.84■■□□□ 1.41
SS18-224ENST00000584083 WTAPQ15007 396 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 CDC37Q16543 378 aaPredicted RBP23.84■■□□□ 1.41
SS18-224ENST00000584083 USH1GQ495M9 461 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 RNF180Q86T96 592 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 LCTP09848 1927 aa23.84■■□□□ 1.41
SS18-224ENST00000584083 CDC45O75419 566 aa23.83■■□□□ 1.41
SS18-224ENST00000584083 CCDC144BQ3MJ40 725 aa23.83■■□□□ 1.41
SS18-224ENST00000584083 TMEM67Q5HYA8 995 aa23.83■■□□□ 1.41
SS18-224ENST00000584083 CHRDL2Q6WN34 429 aa23.83■■□□□ 1.41
SS18-224ENST00000584083 CLEC4DQ8WXI8 215 aa23.83■■□□□ 1.41
SS18-224ENST00000584083 PURBQ96QR8 312 aaKnown RBP23.83■■□□□ 1.41
SS18-224ENST00000584083 ZMYND8Q9ULU4 1186 aaPredicted RBP23.83■■□□□ 1.41
SS18-224ENST00000584083 KLRF2D3W0D1 207 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 SLC27A2O14975 620 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 CALML3P27482 149 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 ADCYAP1R1P41586 468 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 RNF207Q6ZRF8 634 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 MB21D2Q8IYB1 491 aaPredicted RBP23.82■■□□□ 1.4
SS18-224ENST00000584083 STAG2Q8N3U4 1231 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 FERMT2Q96AC1 680 aa23.82■■□□□ 1.4
SS18-224ENST00000584083 ADD3Q9UEY8 706 aaKnown RBP23.82■■□□□ 1.4
SS18-224ENST00000584083 HABP4Q5JVS0 413 aaKnown RBP23.81■■□□□ 1.4
SS18-224ENST00000584083 CREB3L3Q68CJ9 461 aa23.81■■□□□ 1.4
SS18-224ENST00000584083 JMJD4Q9H9V9 463 aa23.81■■□□□ 1.4
SS18-224ENST00000584083 SENP2Q9HC62 589 aa23.81■■□□□ 1.4
SS18-224ENST00000584083 DDX49Q9Y6V7 483 aaKnown RBP23.81■■□□□ 1.4
SS18-224ENST00000584083 ASTN1O14525 1302 aa23.81■■□□□ 1.4
SS18-224ENST00000584083 DUSP11O75319 330 aaKnown RBP23.8■■□□□ 1.4
SS18-224ENST00000584083 SYN1P17600 705 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 ANTXR2P58335 489 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 NECTIN1Q15223 517 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 QRICH1Q2TAL8 776 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 SLC30A10Q6XR72 485 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 CATIPQ7Z7H3 387 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 KATNBL1Q9H079 304 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 SYNRGQ9UMZ2 1314 aa23.8■■□□□ 1.4
SS18-224ENST00000584083 PALM3A6NDB9 673 aaPredicted RBP23.79■■□□□ 1.4
SS18-224ENST00000584083 RPS6P62753 249 aaKnown RBP23.79■■□□□ 1.4
SS18-224ENST00000584083 GRM4Q14833 912 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 SLC39A5Q6ZMH5 540 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 NOL8Q76FK4 1167 aaKnown RBP23.79■■□□□ 1.4
SS18-224ENST00000584083 EEPD1Q7L9B9 569 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 FBXO11Q86XK2 927 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 IGDCC4Q8TDY8 1250 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 SPC25Q9HBM1 224 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 ABCB11O95342 1321 aa23.79■■□□□ 1.4
SS18-224ENST00000584083 BAZ2BQ9UIF8 2168 aaKnown RBP23.78■■□□□ 1.4
SS18-224ENST00000584083 PRC1O43663 620 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 ADAMTS4O75173 837 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 MCM5P33992 734 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 ALDH5A1P51649 535 aaPredicted RBP23.78■■□□□ 1.4
SS18-224ENST00000584083 TNFAIP2Q03169 654 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 RNF20Q5VTR2 975 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 PHF24Q9UPV7 400 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 DNAH12Q6ZR08 3092 aa23.78■■□□□ 1.4
SS18-224ENST00000584083 LRRC37A2A6NM11 1700 aa23.77■■□□□ 1.4
SS18-224ENST00000584083 ADCY6O43306 1168 aa23.77■■□□□ 1.4
SS18-224ENST00000584083 C6orf222P0C671 652 aaPredicted RBP23.77■■□□□ 1.4
SS18-224ENST00000584083 RTP1P59025 263 aa23.77■■□□□ 1.4
SS18-224ENST00000584083 RBM27Q9P2N5 1060 aaKnown RBP23.77■■□□□ 1.4
SS18-224ENST00000584083 ATP11BQ9Y2G3 1177 aa23.77■■□□□ 1.4
SS18-224ENST00000584083 NFXL1Q6ZNB6 911 aa23.76■■□□□ 1.39
SS18-224ENST00000584083 FBXO16Q8IX29 292 aaPredicted RBP23.76■■□□□ 1.39
SS18-224ENST00000584083 RGS22Q8NE09 1264 aa23.76■■□□□ 1.39
SS18-224ENST00000584083 NUP133Q8WUM0 1156 aa23.76■■□□□ 1.39
SS18-224ENST00000584083 MPHOSPH6Q99547 160 aaKnown RBP23.76■■□□□ 1.39
SS18-224ENST00000584083 TSEN34Q9BSV6 310 aaKnown RBP23.76■■□□□ 1.39
SS18-224ENST00000584083 LY9Q9HBG7 655 aa23.76■■□□□ 1.39
SS18-224ENST00000584083 VTA1Q9NP79 307 aa23.76■■□□□ 1.39
SS18-224ENST00000584083 GPHNQ9NQX3 736 aaPredicted RBP23.76■■□□□ 1.39
SS18-224ENST00000584083 MRPL11Q9Y3B7 192 aaKnown RBP23.76■■□□□ 1.39
SS18-224ENST00000584083 LOC102724159A0A0B4J2E5 919 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 ACLYP53396 1101 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 TROAPQ12815 778 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 PWP2Q15269 919 aaKnown RBP23.75■■□□□ 1.39
SS18-224ENST00000584083 KCNA10Q16322 511 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 MCF2L2Q86YR7 1114 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 KLHDC9Q8NEP7 349 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 MORC4Q8TE76 937 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 TMEM87BQ96K49 555 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 MTA3Q9BTC8 594 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 AMNQ9BXJ7 453 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 PDGFCQ9NRA1 345 aa23.75■■□□□ 1.39
SS18-224ENST00000584083 TRIOBPQ9H2D6 2365 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.74■■□□□ 1.39
SS18-224ENST00000584083 A0A1W2PQ45 241 aaPredicted RBP23.74■■□□□ 1.39
SS18-224ENST00000584083 A0A1W2PQY0 241 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms