RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
CCDC47-205ENST00000582331 NAV1Q8NEY1 1877 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 GBF1Q92538 1859 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 TRANK1O15050 2925 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ZNF532Q9HCE3 1301 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ZBBXA8MT70 800 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 CTAGE5O15320 804 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 CABYRO75952 493 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 TRIM27P14373 513 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 PDE6AP16499 860 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
CCDC47-205ENST00000582331 PDE4AP27815 886 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 CDK8P49336 464 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 NKX3-2P78367 333 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 BEX3Q00994 111 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ITGA7Q13683 1181 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 TMEM67Q5HYA8 995 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 CXCL17Q6UXB2 119 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ALYREFQ86V81 257 aaKnown RBP9.17□□□□□ -0.94
CCDC47-205ENST00000582331 HLA-CQ95604 372 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 SLF1Q9BQI6 1058 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
CCDC47-205ENST00000582331 SEZ6LQ9BYH1 1024 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 TNNQ9UQP3 1299 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 NCOR1O75376 2440 aa9.17□□□□□ -0.94
CCDC47-205ENST00000582331 ZBED4O75132 1171 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 TNFAIP2Q03169 654 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 NOL8Q76FK4 1167 aaKnown RBP9.16□□□□□ -0.94
CCDC47-205ENST00000582331 ARMCX2Q7L311 632 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 AMOTL1Q8IY63 956 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 ANKRD35Q8N283 1001 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 PRPF38AQ8NAV1 312 aaKnown RBP9.16□□□□□ -0.94
CCDC47-205ENST00000582331 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-205ENST00000582331 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 TRPV6Q9H1D0 765 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 WNT8AQ9H1J5 351 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 ARMT1Q9H993 441 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 ATP8A2Q9NTI2 1148 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
CCDC47-205ENST00000582331 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-205ENST00000582331 GRIN2DO15399 1336 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 FAM86C2PA6NEL3 165 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 USP17L21D6R901 530 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 PI4K2BG5E9Z4 385 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 ATP2A1O14983 1001 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 PRKAB2O43741 272 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 ZEB2O60315 1214 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 B4GALT4O60513 344 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 CA3P07451 260 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 PFKMP08237 780 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 FSCN1Q16658 493 aaKnown RBP9.15□□□□□ -0.94
CCDC47-205ENST00000582331 KRT40Q6A162 431 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 C16orf86Q6ZW13 317 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.15□□□□□ -0.94
CCDC47-205ENST00000582331 AACSQ86V21 672 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 CCDC144CPQ8IYA2 1237 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 TMEM57Q8N5G2 664 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 SCLYQ96I15 445 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 FGD4Q96M96 766 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 NUP88Q99567 741 aaPredicted RBP9.15□□□□□ -0.94
CCDC47-205ENST00000582331 KATNBL1Q9H079 304 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 AP5M1Q9H0R1 490 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 C11orf16Q9NQ32 467 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
CCDC47-205ENST00000582331 ASTN1O14525 1302 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-205ENST00000582331 F5H6K3 240 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 GOLIM4O00461 696 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 DYNC1LI2O43237 492 aaPredicted RBP9.14□□□□□ -0.95
CCDC47-205ENST00000582331 ACTN1P12814 892 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 KLRC3Q07444 240 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 TTLL4Q14679 1199 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 CHST13Q8NET6 341 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 PHOSPHO2Q8TCD6 241 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 ARNTL2Q8WYA1 636 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 VWCEQ96DN2 955 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 C1orf115Q9H7X2 142 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
CCDC47-205ENST00000582331 GNEQ9Y223 722 aaKnown RBP9.14□□□□□ -0.95
CCDC47-205ENST00000582331 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
CCDC47-205ENST00000582331 MYH8P13535 1937 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 KIF28PB7ZC32 967 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 MBD4O95243 580 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 PSMC6P62333 389 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 TAP1Q03518 808 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms