RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 XRCC6P12956 609 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■■■□□ 17.2
EIF4A1-216ENST00000580888 SMARCA1P28370 1054 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 SHMT1P34896 483 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 HERVK_113P62684 666 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 CERKLQ49MI3 558 aaPredicted RBP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 GTF3C2Q8WUA4 911 aaPredicted RBP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 RNF208Q9H0X6 261 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 BIN2Q9UBW5 565 aaPredicted RBP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 GJD2Q9UKL4 321 aa20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 MORC2Q9Y6X9 1032 aaPredicted RBP20.48■□□□□ 0.87
EIF4A1-216ENST00000580888 MYH6P13533 1939 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 INHAP05111 366 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 TOP1P11387 765 aaKnown RBP20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 ELNP15502 786 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 LIG1P18858 919 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 FAM177A1Q8N128 213 aaPredicted RBP20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 LZTS2Q9BRK4 669 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 PHF20Q9BVI0 1012 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 KIAA1683Q9H0B3 1180 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 UNC93B1Q9H1C4 597 aa20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
EIF4A1-216ENST00000580888 A0A1W2PQ27 194 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 A0A1W2PQ64 194 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 A0A1W2PQD8 194 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 SYCE3A1L190 88 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 USP14P54578 494 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 RBM43Q6ZSC3 357 aaKnown RBP20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 NOSTRINQ8IVI9 506 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 KCNG4Q8TDN1 519 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 CEP95Q96GE4 821 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 CCDC17Q96LX7 622 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 DDX19AQ9NUU7 478 aaKnown RBP20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 CLIC4Q9Y696 253 aa20.46■□□□□ 0.87
EIF4A1-216ENST00000580888 RLFQ13129 1914 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 SGPL1O95470 568 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 XBP1P17861 261 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 PTPAQ15257 358 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 NPY5RQ15761 445 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 PFKFB3Q16875 520 aaPredicted RBP20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 ADALQ6DHV7 355 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 DIS3L2Q8IYB7 885 aaKnown RBP20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 CCDC82Q8N4S0 544 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 GPRC5AQ8NFJ5 357 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 U2AF1L4Q8WU68 220 aaKnown RBP20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 FUCA2Q9BTY2 467 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 TXNRD2Q9NNW7 524 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 CABP5Q9NP86 173 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 PAK6Q9NQU5 681 aaPredicted RBP20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 RBPJLQ9UBG7 517 aa20.45■□□□□ 0.86
EIF4A1-216ENST00000580888 GOLGA6L4A6NEF3 574 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 AKR1B1P15121 316 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 SLC35G1Q2M3R5 365 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 POTEEQ6S8J3 1075 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 ENGASEQ8NFI3 743 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 TNFRSF25Q93038 417 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 SH3GLB2Q9NR46 395 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 PCDHA7Q9UN72 937 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 KCNJ14Q9UNX9 436 aa20.44■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L15C9J2P7 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L13C9JLJ4 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L11C9JVI0 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L18D6R9N7 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L22D6RA61 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L17D6RBQ6 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L19D6RCP7 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L20D6RJB6 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 SPTLC2O15270 562 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 PPP6R2O75170 966 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 HMGCRP04035 888 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 SNHG28P0DPA3 235 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 SCG2P13521 617 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 ERVK-9P63128 1117 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 ERVK-24P63145 666 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 USP17L24Q0WX57 530 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 LBX2Q6XYB7 198 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 ACER1Q8TDN7 264 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 FEZ1Q99689 392 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 SPZ1Q9BXG8 430 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 STX8Q9UNK0 236 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
EIF4A1-216ENST00000580888 A0A0G2JMZ2 1700 aa20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 MAPK4P31152 587 aa20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 TOB1P50616 345 aaPredicted RBP20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 CEBPZQ03701 1054 aaKnown RBP20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 AXDND1Q5T1B0 1012 aaPredicted RBP20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 CATSPERGQ6ZRH7 1159 aa20.42■□□□□ 0.86
EIF4A1-216ENST00000580888 SOCS4Q8WXH5 440 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms