RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 R3HDMLQ9H3Y0 253 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 MGAMO43451 1857 aa18.34■□□□□ 0.53
CSNK1D-212ENST00000580061 TBC1D8O95759 1140 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 ALAS1P13196 640 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 SAGE1Q9NXZ1 904 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 VPS54Q9P1Q0 977 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 PLXNB2O15031 1838 aa18.33■□□□□ 0.52
CSNK1D-212ENST00000580061 ZNFX1Q9P2E3 1918 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 SLC25A27O95847 323 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 COPB2P35606 906 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 NAPAP54920 295 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 CCNA1P78396 465 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 RNF146Q9NTX7 359 aa18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 MRPL11Q9Y3B7 192 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-212ENST00000580061 OPLAHO14841 1288 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 XBP1P17861 261 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 ERCC3P19447 782 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 NCAPG2Q86XI2 1143 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 FAM177A1Q8N128 213 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 CHST13Q8NET6 341 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 CCDC148Q8NFR7 591 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 CCDC12Q8WUD4 166 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 PORCNQ9H237 461 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 MROH8Q9H579 483 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 HOMER2Q9NSB8 354 aa18.31■□□□□ 0.52
CSNK1D-212ENST00000580061 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 ZMYND12Q9H0C1 365 aa18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 WBP1LQ9NX94 342 aa18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 DAXXQ9UER7 740 aaPredicted RBP18.3■□□□□ 0.52
CSNK1D-212ENST00000580061 ZSWIM8A7E2V4 1837 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 NFIBO00712 420 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 FOSBP53539 338 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 TRIM29Q14134 588 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 BEGAINQ9BUH8 593 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 PHF20Q9BVI0 1012 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 EFCC1Q9HA90 598 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 KCNJ14Q9UNX9 436 aa18.29■□□□□ 0.52
CSNK1D-212ENST00000580061 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 LCTP09848 1927 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 PDCP20941 246 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 NLRP5P59047 1200 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 GHRHRQ02643 423 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 KRT40Q6A162 431 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 MCF2L2Q86YR7 1114 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 JMYQ8N9B5 988 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 RGS22Q8NE09 1264 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 TBC1D5Q92609 795 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 PSTPIP2Q9H939 334 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 RIC8AQ9NPQ8 531 aa18.28■□□□□ 0.52
CSNK1D-212ENST00000580061 MMP1P03956 469 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 CALML3P27482 149 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 GNA11P29992 359 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 MAPK4P31152 587 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 ADCY7P51828 1080 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 GUCY1B3Q02153 619 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 SP3Q02447 781 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 NPY5RQ15761 445 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 GALNT17Q6IS24 598 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 CCAR1Q8IX12 1150 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 CUL5Q93034 780 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 MAF1Q9H063 256 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 C6orf50Q9HD87 102 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 ZNF236Q9UL36 1845 aa18.27■□□□□ 0.52
CSNK1D-212ENST00000580061 PLXNA1Q9UIW2 1896 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 GPR25O00155 361 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 MEIS2O14770 477 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 CFBP00751 764 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 SYT1P21579 422 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 HSD17B4P51659 736 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 MRPL12P52815 198 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 LACTBP83111 547 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 GPR142Q7Z601 462 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 TEX2Q8IWB9 1127 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 SAMD3Q8N6K7 520 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 DAGLBQ8NCG7 672 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 GLT8D2Q9H1C3 349 aa18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
CSNK1D-212ENST00000580061 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms