RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 RANBP6O60518 1105 aaKnown RBP14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 NMT2O60551 498 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 NEFLP07196 543 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 ALAS1P13196 640 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 TNFAIP2Q03169 654 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 B4GALNT3Q6L9W6 998 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 TTYH1Q9H313 450 aaPredicted RBP14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
SMARCD2-207ENST00000578234 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 ARVCFO00192 962 aa14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 PDE1AP54750 535 aa14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 PPP1R12CQ9BZL4 782 aa14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 PRUNE2Q8WUY3 3088 aa14.84□□□□□ -0.03
SMARCD2-207ENST00000578234 CDH23Q9H251 3354 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 FGAP02671 866 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 SNAP25P60880 206 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 DCAF4Q8WV16 495 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 CYP39A1Q9NYL5 469 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 GNEQ9Y223 722 aaKnown RBP14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 ASTN1O14525 1302 aa14.83□□□□□ -0.04
SMARCD2-207ENST00000578234 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 TLR3O15455 904 aaKnown RBP14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 CABYRO75952 493 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 ICAM1P05362 532 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 ACRP10323 421 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 BEX3Q00994 111 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 MCMDC2Q4G0Z9 681 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 BTNL9Q6UXG8 535 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 FAM126BQ8IXS8 530 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 SLC43A3Q8NBI5 491 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 Q9Y3F1 56 aa14.82□□□□□ -0.04
SMARCD2-207ENST00000578234 CD4P01730 458 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 TOP1P11387 765 aaKnown RBP14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 PPIGQ13427 754 aaKnown RBP eCLIP14.81□□□□□ -0.041e-7■■■■□ 23.6
SMARCD2-207ENST00000578234 TAPT1Q6NXT6 567 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 C16orf59Q7L2K0 433 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 TMEM199Q8N511 208 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.045e-8■■■■□ 20
SMARCD2-207ENST00000578234 SEZ6LQ9BYH1 1024 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
SMARCD2-207ENST00000578234 LOC102724159A0A0B4J2E5 919 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 GRXCR1A8MXD5 290 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 DYNC1LI2O43237 492 aaPredicted RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 ZEB2O60315 1214 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 HSPD1P10809 573 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 PCP11498 1178 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 CSF2RAP15509 400 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 SMPD1P17405 629 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 DNAJB2P25686 324 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 GRIN2CQ14957 1233 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 PWP2Q15269 919 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 TMEM240Q5SV17 173 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 TTBK2Q6IQ55 1244 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 TIFAQ96CG3 184 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 TTC14Q96N46 770 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 TMEM47Q9BQJ4 181 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 VTA1Q9NP79 307 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 PDGFCQ9NRA1 345 aa14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 ADD3Q9UEY8 706 aaKnown RBP14.8□□□□□ -0.04
SMARCD2-207ENST00000578234 SLC16A2P36021 539 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 BAATQ14032 418 aaPredicted RBP14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 RRP12Q5JTH9 1297 aaKnown RBP14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 RASIP1Q5U651 963 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 SYDE2Q5VT97 1194 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 SMC5Q8IY18 1101 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 GAS2L1Q99501 681 aaPredicted RBP14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 ZNF576Q9H609 170 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 DDX49Q9Y6V7 483 aaKnown RBP14.79□□□□□ -0.04
SMARCD2-207ENST00000578234 GRIN2DO15399 1336 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 PDHBP11177 359 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 IGFBP4P22692 258 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 CYP2C18P33260 490 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 NMIQ13287 307 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 CCDC85BQ15834 202 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms