RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ACRP10323 421 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-214ENST00000572365 ASPAP45381 313 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 PREPP48147 710 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 YARSP54577 528 aaKnown RBP7.5□□□□□ -1.21
SF3B3-214ENST00000572365 NFE2L2Q16236 605 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 GIMAP6Q6P9H5 292 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 TTC6Q86TZ1 520 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 ISL2Q96A47 359 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 CEP41Q9BYV8 373 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 FBRSQ9HAH7 460 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 FAM105AQ9NUU6 356 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 MSRB2Q9Y3D2 182 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
SF3B3-214ENST00000572365 EIF3AQ14152 1382 aaKnown RBP7.49□□□□□ -1.21
SF3B3-214ENST00000572365 KCPQ6ZWJ8 1503 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-214ENST00000572365 CHURC1-FNTBB4DL54 471 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 IL2RBP14784 551 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 SLBPQ14493 270 aaKnown RBP eCLIP7.49□□□□□ -1.21
SF3B3-214ENST00000572365 BMS1Q14692 1282 aaKnown RBP7.49□□□□□ -1.21
SF3B3-214ENST00000572365 NKG7Q16617 165 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 PIDD1Q9HB75 910 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 SLC12A7Q9Y666 1083 aa7.49□□□□□ -1.21
SF3B3-214ENST00000572365 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 NOS3P29474 1203 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 ADGRE1Q14246 886 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 MBTPS1Q14703 1052 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 PPP2R5EQ16537 467 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 FXNQ16595 210 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 DDR2Q16832 855 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 CCDC88AQ3V6T2 1871 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 PPIP5K1Q6PFW1 1433 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 CDC37L1Q7L3B6 337 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 UBE3DQ7Z6J8 389 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-214ENST00000572365 FAM13CQ8NE31 585 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
SF3B3-214ENST00000572365 SLC9A7Q96T83 725 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 ACSS3Q9H6R3 686 aa7.48□□□□□ -1.21
SF3B3-214ENST00000572365 ADGRB1O14514 1584 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 GLB1P16278 677 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 CCNFP41002 786 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 FSTL1Q12841 308 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 RASA3Q14644 834 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 UVSSAQ2YD98 709 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 ZNF746Q6NUN9 644 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-214ENST00000572365 UNC5AQ6ZN44 842 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 SBF1O95248 1867 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 LY75O60449 1722 aa7.47□□□□□ -1.21
SF3B3-214ENST00000572365 SART1O43290 800 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 RNGTTO60942 597 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 RAG1P15918 1043 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 DPEP1P16444 411 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 IREB2P48200 963 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 LBX1P52954 281 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 ZYXQ15942 572 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 LARP1BQ659C4 914 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 MICAL1Q8TDZ2 1067 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
SF3B3-214ENST00000572365 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 PCOLCE2Q9UKZ9 415 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 RGPD2P0DJD1 1756 aa7.46□□□□□ -1.22
SF3B3-214ENST00000572365 CPSF1Q10570 1443 aaKnown RBP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 PIK3C2AO00443 1686 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 DOT1LQ8TEK3 1739 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 RGS13O14921 159 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 FBLN1P23142 703 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 PRAMEF13Q5VWM6 474 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 CYB5D2Q8WUJ1 264 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 EZH1Q92800 747 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 MRFAP1L1Q96HT8 127 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 ABHD8Q96I13 439 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 DEPDC7Q96QD5 511 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 SRPK1Q96SB4 655 aaKnown RBP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 PHAXQ9H814 394 aaKnown RBP7.45□□□□□ -1.22
SF3B3-214ENST00000572365 RNF181Q9P0P0 153 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 TAF1LQ8IZX4 1826 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 PDE4DIPQ5VU43 2346 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 CCDC7Q96M83 1385 aa7.45□□□□□ -1.22
SF3B3-214ENST00000572365 TLDC2A0PJX2 215 aa7.44□□□□□ -1.22
SF3B3-214ENST00000572365 FAM221BA6H8Z2 402 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms