RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	USP17L4	A6NCW7	530 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820		G3V3G9	751 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	PRPF3	O43395	683 aa	Known RBP	13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	TSPY3	P0CV98	308 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	TSPY8	P0CW00	308 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	SSR1	P43307	286 aa	Known RBP	13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	CDK8	P49336	464 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	DCAF8	Q5TAQ9	597 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	USP17L1	Q7RTZ2	530 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	DIS3L2	Q8IYB7	885 aa	Known RBP	13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	FAM204A	Q9H8W3	233 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	LZTFL1	Q9NQ48	299 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	SIPA1L1	O43166	1804 aa		13.46	□□□□□ -0.25
SPG7-222	ENST00000569820	KIF5C	O60282	957 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	ECE2	O60344	883 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	SCNN1D	P51172	638 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	PNOC	Q13519	176 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	C11orf91	Q3C1V1	193 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	TADA2B	Q86TJ2	420 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	NOSTRIN	Q8IVI9	506 aa		13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	CTCFL	Q8NI51	663 aa	Predicted RBP	13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	TACO1	Q9BSH4	297 aa	Known RBP	13.46	□□□□□ -0.26
SPG7-222	ENST00000569820	BTBD18	B2RXH4	712 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	RHOXF2B	P0C7M4	288 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	VSNL1	P62760	191 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	SF3B2	Q13435	895 aa	Known RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	TUBB2A	Q13885	445 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	HSP90AA4P	Q58FG1	418 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	HHIPL2	Q6UWX4	724 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	SRBD1	Q8N5C6	995 aa	Known RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	JMY	Q8N9B5	988 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	PNMA1	Q8ND90	353 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	MAP3K14	Q99558	947 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	RHOXF2	Q9BQY4	288 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	TUBB2B	Q9BVA1	445 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	KAT14	Q9H8E8	782 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	ZNF287	Q9HBT7	754 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	DDX4	Q9NQI0	724 aa	Known RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	hCG_1642624	A0A1W2PR95	340 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	MARCKS	P29966	332 aa	Predicted RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	SLC39A14	Q15043	492 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	PTPA	Q15257	358 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	CCDC178	Q5BJE1	867 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	DACT2	Q5SW24	774 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	STRIP1	Q5VSL9	837 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	FOXP1	Q9H334	677 aa	Predicted RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	PLEKHA4	Q9H4M7	779 aa		13.45	□□□□□ -0.26
SPG7-222	ENST00000569820		V9GY48	417 aa	Predicted RBP	13.45	□□□□□ -0.26
SPG7-222	ENST00000569820	GREB1L	Q9C091	1923 aa	Predicted RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	GOLGB1	Q14789	3259 aa	Known RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820		A0A087WUV0	522 aa	Predicted RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	TUBB	P07437	444 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	FKBP1A	P62942	108 aa	Known RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	AKAP17A	Q02040	695 aa	Known RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	PICALM	Q13492	652 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	MTF1	Q14872	753 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	SAFB	Q15424	915 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	AOC3	Q16853	763 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	KIF4B	Q2VIQ3	1234 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	TEKT1	Q969V4	418 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	FAM107B	Q9H098	131 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	VPS54	Q9P1Q0	977 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	GABPA	Q06546	454 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	NR5A1	Q13285	461 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	CDC42EP5	Q6NZY7	148 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	OXER1	Q8TDS5	423 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	PHF20	Q9BVI0	1012 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	HPSE	Q9Y251	543 aa		13.44	□□□□□ -0.26
SPG7-222	ENST00000569820	PLIN4	Q96Q06	1357 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	SOWAHD	A6NJG2	315 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	KIF5B	P33176	963 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	CRK	P46108	304 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	TOB1	P50616	345 aa	Predicted RBP	13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	GRM4	Q14833	912 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	CC2D2B	Q6DHV5	1058 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	MICALL1	Q8N3F8	863 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	NEDD1	Q8NHV4	660 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	AFAP1L1	Q8TED9	768 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	FAM212A	Q96EL1	285 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	USP40	Q9NVE5	1235 aa		13.43	□□□□□ -0.26
SPG7-222	ENST00000569820	CTAGE15	A4D2H0	777 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	CTAGE9	A4FU28	777 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	KLHL33	A6NCF5	533 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	RNF40	O75150	1001 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	CTAGE8	P0CG41	777 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	ZNF569	Q5MCW4	686 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	CTAGE6	Q86UF2	777 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	KIAA0825	Q8IV33	1275 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	CTAGE4	Q8IX94	777 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	ZDHHC15	Q96MV8	337 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	TMEM47	Q9BQJ4	181 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	ADGRG1	Q9Y653	693 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	TTC36	A6NLP5	189 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	PPP6R2	O75170	966 aa		13.42	□□□□□ -0.26
SPG7-222	ENST00000569820	XBP1	P17861	261 aa		13.42	□□□□□ -0.26

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