RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
CLK3-224ENST00000568605 MYH7BA7E2Y1 1941 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
CLK3-224ENST00000568605 CYP2C19P33261 490 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 RGS19P49795 217 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 MLLT1Q03111 559 aaPredicted RBP15.09■□□□□ 0.01
CLK3-224ENST00000568605 TRIM32Q13049 653 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 USH1GQ495M9 461 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 NSMFQ6X4W1 530 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 MICU3Q86XE3 530 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 USP26Q9BXU7 913 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 MAF1Q9H063 256 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 JMJD4Q9H9V9 463 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 ADD3Q9UEY8 706 aaKnown RBP15.09■□□□□ 0.01
CLK3-224ENST00000568605 CNPY2Q9Y2B0 182 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 SYNGAP1Q96PV0 1343 aa15.09■□□□□ 0.01
CLK3-224ENST00000568605 PTPDC1A2A3K4 754 aa15.08■□□□□ 0
CLK3-224ENST00000568605 ZBTB5O15062 677 aa15.08■□□□□ 0
CLK3-224ENST00000568605 SGPL1O95470 568 aa15.08■□□□□ 0
CLK3-224ENST00000568605 CYBAP13498 195 aa15.08■□□□□ 0
CLK3-224ENST00000568605 CNGA1P29973 690 aa15.08■□□□□ 0
CLK3-224ENST00000568605 RCAN1P53805 252 aa15.08■□□□□ 0
CLK3-224ENST00000568605 MUM1L1Q5H9M0 696 aa15.08■□□□□ 0
CLK3-224ENST00000568605 HOMER1Q86YM7 354 aa15.08■□□□□ 0
CLK3-224ENST00000568605 MYL10Q9BUA6 226 aa15.08■□□□□ 0
CLK3-224ENST00000568605 SPZ1Q9BXG8 430 aa15.08■□□□□ 0
CLK3-224ENST00000568605 VAT1LQ9HCJ6 419 aa15.08■□□□□ 0
CLK3-224ENST00000568605 RBM28Q9NW13 759 aaKnown RBP15.08■□□□□ 0
CLK3-224ENST00000568605 CYP39A1Q9NYL5 469 aa15.08■□□□□ 0
CLK3-224ENST00000568605 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
CLK3-224ENST00000568605 MRPL11Q9Y3B7 192 aaKnown RBP15.08■□□□□ 0
CLK3-224ENST00000568605 BRCA2P51587 3418 aa15.07■□□□□ 0
CLK3-224ENST00000568605 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
CLK3-224ENST00000568605 ASB14A6NK59 587 aa15.07■□□□□ 0
CLK3-224ENST00000568605 ZBTB43O43298 467 aa15.07■□□□□ 0
CLK3-224ENST00000568605 EN2P19622 333 aaPredicted RBP15.07■□□□□ 0
CLK3-224ENST00000568605 RPS6KB1P23443 525 aa15.07■□□□□ 0
CLK3-224ENST00000568605 SMARCA1P28370 1054 aa15.07■□□□□ 0
CLK3-224ENST00000568605 EXOSC10Q01780 885 aaKnown RBP15.07■□□□□ 0
CLK3-224ENST00000568605 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
CLK3-224ENST00000568605 APOA5Q6Q788 366 aa15.07■□□□□ 0
CLK3-224ENST00000568605 MAMDC4Q6UXC1 1216 aa15.07■□□□□ 0
CLK3-224ENST00000568605 RNF207Q6ZRF8 634 aa15.07■□□□□ 0
CLK3-224ENST00000568605 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
CLK3-224ENST00000568605 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
CLK3-224ENST00000568605 ANKLE1Q8NAG6 615 aa15.07■□□□□ 0
CLK3-224ENST00000568605 TCEANC2Q96MN5 208 aa15.07■□□□□ 0
CLK3-224ENST00000568605 RIOX1Q9H6W3 641 aa15.07■□□□□ 0
CLK3-224ENST00000568605 GPHNQ9NQX3 736 aaPredicted RBP15.07■□□□□ 0
CLK3-224ENST00000568605 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
CLK3-224ENST00000568605 KLF18A0A0U1RQI7 1052 aa15.06■□□□□ 0
CLK3-224ENST00000568605 B4DLN1 442 aa15.06■□□□□ 0
CLK3-224ENST00000568605 NFIBO00712 420 aa15.06■□□□□ 0
CLK3-224ENST00000568605 TFRCP02786 760 aaKnown RBP15.06■□□□□ 0
CLK3-224ENST00000568605 CCND3P30281 292 aaPredicted RBP15.06■□□□□ 0
CLK3-224ENST00000568605 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
CLK3-224ENST00000568605 ANAPC15P60006 121 aa15.06■□□□□ 0
CLK3-224ENST00000568605 RTN1Q16799 776 aa15.06■□□□□ 0
CLK3-224ENST00000568605 Q6ZUG5 572 aa15.06■□□□□ 0
CLK3-224ENST00000568605 SHISA4Q96DD7 197 aa15.06■□□□□ 0
CLK3-224ENST00000568605 MTMR8Q96EF0 704 aa15.06■□□□□ 0
CLK3-224ENST00000568605 RRP36Q96EU6 259 aaKnown RBP15.06■□□□□ 0
CLK3-224ENST00000568605 TM6SF1Q9BZW5 370 aa15.06■□□□□ 0
CLK3-224ENST00000568605 DDX20Q9UHI6 824 aaKnown RBP15.06■□□□□ 0
CLK3-224ENST00000568605 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
CLK3-224ENST00000568605 PNMA6FA0A0J9YX94 578 aa15.05■□□□□ -0
CLK3-224ENST00000568605 GOLGA8AA7E2F4 631 aa15.05■□□□□ -0
CLK3-224ENST00000568605 GOLGA8BA8MQT2 603 aa15.05■□□□□ -0
CLK3-224ENST00000568605 SEPT4O43236 478 aa15.05■□□□□ -0
CLK3-224ENST00000568605 FARP2O94887 1054 aaPredicted RBP15.05■□□□□ -0
CLK3-224ENST00000568605 IGHA2P01877 340 aa15.05■□□□□ -0
CLK3-224ENST00000568605 TAL1P17542 331 aaPredicted RBP15.05■□□□□ -0
CLK3-224ENST00000568605 RXRAP19793 462 aa15.05■□□□□ -0
CLK3-224ENST00000568605 PPP2R5BQ15173 497 aa15.05■□□□□ -0
CLK3-224ENST00000568605 RUFY3Q7L099 469 aa15.05■□□□□ -0
CLK3-224ENST00000568605 ARMCX2Q7L311 632 aa15.05■□□□□ -0
CLK3-224ENST00000568605 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ -0
CLK3-224ENST00000568605 FANCBQ8NB91 859 aa15.05■□□□□ -0
CLK3-224ENST00000568605 RGS22Q8NE09 1264 aa15.05■□□□□ -0
CLK3-224ENST00000568605 PIGSQ96S52 555 aa15.05■□□□□ -0
CLK3-224ENST00000568605 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
CLK3-224ENST00000568605 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
CLK3-224ENST00000568605 DOCK5Q9H7D0 1870 aa15.04■□□□□ -0
CLK3-224ENST00000568605 NID2Q14112 1375 aa15.04■□□□□ -0
CLK3-224ENST00000568605 CCDC196A0A1B0GTZ2 297 aa15.04■□□□□ -0
CLK3-224ENST00000568605 AKR1A1P14550 325 aa15.04■□□□□ -0
CLK3-224ENST00000568605 CALML3P27482 149 aa15.04■□□□□ -0
CLK3-224ENST00000568605 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
CLK3-224ENST00000568605 BAATQ14032 418 aaPredicted RBP15.04■□□□□ -0
CLK3-224ENST00000568605 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
CLK3-224ENST00000568605 SLC30A10Q6XR72 485 aa15.04■□□□□ -0
CLK3-224ENST00000568605 TMTC3Q6ZXV5 915 aa15.04■□□□□ -0
CLK3-224ENST00000568605 FBXL16Q8N461 479 aa15.04■□□□□ -0
CLK3-224ENST00000568605 SAMD3Q8N6K7 520 aa15.04■□□□□ -0
CLK3-224ENST00000568605 DNERQ8NFT8 737 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms