RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PRKCSHP14314 528 aaPredicted RBP20.47■□□□□ 0.87
SMPD3-211ENST00000568373 KCNA3P22001 575 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 SLFN13Q68D06 897 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 CUL5Q93034 780 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 MYL1P05976 194 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 CABP7Q86V35 215 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 CUEDC2Q9H467 287 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 KBTBD4Q9NVX7 518 aa20.47■□□□□ 0.87
SMPD3-211ENST00000568373 SPDYE2BA6NHP3 402 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 RAD21O60216 631 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 GDF11O95390 407 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 SPDYE6P0CI01 402 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 DPEP1P16444 411 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 CLK2P49760 499 aaKnown RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 MRPL12P52815 198 aaKnown RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 ZNF658Q5TYW1 1059 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 CSRNP1Q96S65 589 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 EDIL3O43854 480 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 STX17P56962 302 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 IGSF22Q8N9C0 903 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 SLC16A10Q8TF71 515 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 GMLQ99445 158 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 MAGEF1Q9HAY2 307 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 TMOD2Q9NZR1 351 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
SMPD3-211ENST00000568373 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
SMPD3-211ENST00000568373 UQCRHLA0A096LP55 91 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 PSMD14O00487 310 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 RAD17O75943 681 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 UQCRHP07919 91 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 TECP42680 631 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 CALCRLQ16602 461 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 UBE2SQ16763 222 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 TPD52L1Q16890 204 aaPredicted RBP20.45■□□□□ 0.86
SMPD3-211ENST00000568373 GMCL1P1Q8NEA9 526 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 KCND1Q9NSA2 647 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 CTNND2Q9UQB3 1225 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 COL4A5P29400 1685 aa20.45■□□□□ 0.86
SMPD3-211ENST00000568373 NRDCO43847 1150 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 PLCG1P19174 1290 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 TNNI2P48788 182 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 QRICH1Q2TAL8 776 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
SMPD3-211ENST00000568373 CDKAL1Q5VV42 579 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 LRRC15Q8TF66 581 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 C16orf45Q96MC5 204 aaPredicted RBP20.44■□□□□ 0.86
SMPD3-211ENST00000568373 PLIN2Q99541 437 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 PSTPIP2Q9H939 334 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 F5H6K3 240 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 SLC37A4O43826 429 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 TDP2O95551 362 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 KLRC3Q07444 240 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 HERC5Q9UII4 1024 aaKnown RBP20.44■□□□□ 0.86
SMPD3-211ENST00000568373 RWDD2AQ9UIY3 292 aa20.44■□□□□ 0.86
SMPD3-211ENST00000568373 A0A1B0GTH6 734 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 GH2P01242 217 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 TXKP42681 527 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 KCNJ6P48051 423 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 FXR2P51116 673 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMPD3-211ENST00000568373 SEMA3FQ13275 785 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 KCNB1Q14721 858 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 PPP4R3AQ6IN85 833 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 APTXQ7Z2E3 356 aaKnown RBP20.43■□□□□ 0.86
SMPD3-211ENST00000568373 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 VPS33BQ9H267 617 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 KIF13BQ9NQT8 1826 aa20.43■□□□□ 0.86
SMPD3-211ENST00000568373 USP27XA6NNY8 438 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 JAG1P78504 1218 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 PAK1Q13153 545 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 NR1I3Q14994 352 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 DLGAP5Q15398 846 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 MYRIPQ8NFW9 859 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 MMTAG2Q9BU76 263 aaKnown RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 TCP10L2B9ZVM9 353 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 NDUFB10O96000 172 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 TBX2Q13207 712 aaPredicted RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 RRP1BQ14684 758 aaKnown RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 PTPN21Q16825 1174 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 SPECC1LQ69YQ0 1117 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 CCAR2Q8N163 923 aaKnown RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 CCDC112Q8NEF3 446 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
SMPD3-211ENST00000568373 GDAQ9Y2T3 454 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 PCDHA1Q9Y5I3 950 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 MYH7BA7E2Y1 1941 aa20.42■□□□□ 0.86
SMPD3-211ENST00000568373 CLRN2A0PK11 232 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 KLRC4O43908 158 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 TNNT1P13805 278 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 TMEM266Q2M3C6 531 aa20.41■□□□□ 0.86
SMPD3-211ENST00000568373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms