RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 UMODL1Q5DID0 1318 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 BMP3P12645 472 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 FSCN1Q16658 493 aaKnown RBP15.22■□□□□ 0.03
RNF40-208ENST00000565995 TKFCQ3LXA3 575 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 TAPT1Q6NXT6 567 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 CXCL17Q6UXB2 119 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 ZNF444Q8N0Y2 327 aaPredicted RBP15.22■□□□□ 0.03
RNF40-208ENST00000565995 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 NEDD1Q8NHV4 660 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 AGBL1Q96MI9 1066 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 WNT8AQ9H1J5 351 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 A1CFQ9NQ94 594 aaKnown RBP15.22■□□□□ 0.03
RNF40-208ENST00000565995 BRWD1Q9NSI6 2320 aa15.22■□□□□ 0.03
RNF40-208ENST00000565995 SMPD1P17405 629 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 GNAT2P19087 354 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 IGFBP4P22692 258 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 SLC4A3P48751 1232 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.03
RNF40-208ENST00000565995 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 CHURC1Q8WUH1 139 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 APPBP2Q92624 585 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 GMCL1Q96IK5 515 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 LRRCC1Q9C099 1032 aa15.21■□□□□ 0.03
RNF40-208ENST00000565995 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
RNF40-208ENST00000565995 CHMP4BQ9H444 224 aaKnown RBP15.21■□□□□ 0.03
RNF40-208ENST00000565995 EPB41L4AQ9HCS5 686 aaPredicted RBP15.21■□□□□ 0.03
RNF40-208ENST00000565995 ZEB2O60315 1214 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 B4GALT4O60513 344 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 PFKMP08237 780 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 PLA2G5P39877 138 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 OTOP2Q7RTS6 562 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 FAM160B2Q86V87 743 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 AP5M1Q9H0R1 490 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 TRPV6Q9H1D0 765 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
RNF40-208ENST00000565995 SLC4A7Q9Y6M7 1214 aa15.2■□□□□ 0.02
RNF40-208ENST00000565995 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
RNF40-208ENST00000565995 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
RNF40-208ENST00000565995 TMEM232C9JQI7 657 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
RNF40-208ENST00000565995 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
RNF40-208ENST00000565995 STAT2P52630 851 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
RNF40-208ENST00000565995 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 ECHDC1Q9NTX5 307 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 RNF146Q9NTX7 359 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 RAPGEFL1Q9UHV5 662 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 SIP14410 1827 aa15.19■□□□□ 0.02
RNF40-208ENST00000565995 ERC2O15083 957 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 DYNC1LI2O43237 492 aaPredicted RBP15.18■□□□□ 0.02
RNF40-208ENST00000565995 GPAA1O43292 621 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 PRDM1O75626 825 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 CCL23P55773 120 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 AAK1Q2M2I8 961 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 LRRC47Q8N1G4 583 aaKnown RBP15.18■□□□□ 0.02
RNF40-208ENST00000565995 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
RNF40-208ENST00000565995 VTA1Q9NP79 307 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 PDGFCQ9NRA1 345 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
RNF40-208ENST00000565995 RBM47A0AV96 593 aaKnown RBP15.17■□□□□ 0.02
RNF40-208ENST00000565995 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 RABGGTBP53611 331 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 PDE4BQ07343 736 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 DUSP28Q4G0W2 176 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 RCSD1Q6JBY9 416 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
RNF40-208ENST00000565995 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 MTCH2Q9Y6C9 303 aa15.17■□□□□ 0.02
RNF40-208ENST00000565995 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
RNF40-208ENST00000565995 TSPY3P0CV98 308 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 TSPY8P0CW00 308 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 MYOGP15173 224 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
RNF40-208ENST00000565995 NOVP48745 357 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 TDO2P48775 406 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 TFAP4Q01664 338 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 TMEM63BQ5T3F8 832 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 PHOSPHO2Q8TCD6 241 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
RNF40-208ENST00000565995 M0R2C6 588 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 ALAS1P13196 640 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 PTGS1P23219 599 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 RFC2P35250 354 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 SLC1A4P43007 532 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 PSMC6P62333 389 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 TTLL4Q14679 1199 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms