RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
SF3B3-202ENST00000562722 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
SF3B3-202ENST00000562722 TIFAQ96CG3 184 aa15.35■□□□□ 0.05
SF3B3-202ENST00000562722 IL17RBQ9NRM6 502 aa15.35■□□□□ 0.05
SF3B3-202ENST00000562722 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SF3B3-202ENST00000562722 A0A0C4DFX4 3053 aa15.35■□□□□ 0.05
SF3B3-202ENST00000562722 LAMA2P24043 3122 aaKnown RBP15.34■□□□□ 0.05
SF3B3-202ENST00000562722 CTAGE5O15320 804 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 DYNC1LI2O43237 492 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-202ENST00000562722 PLA2G6O60733 806 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 CABYRO75952 493 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 ACRP10323 421 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 CYP2C18P33260 490 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 GRIN2CQ14957 1233 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
SF3B3-202ENST00000562722 MUM1L1Q5H9M0 696 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 PSRC1Q6PGN9 363 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-202ENST00000562722 DCAF4Q8WV16 495 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 EVI5LQ96CN4 794 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 UNC80Q8N2C7 3258 aa15.34■□□□□ 0.05
SF3B3-202ENST00000562722 MCM3APO60318 1980 aa15.33■□□□□ 0.05
SF3B3-202ENST00000562722 CUL9Q8IWT3 2517 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 FOXP2O15409 715 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 ICAM1P05362 532 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 SMPD1P17405 629 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 PTGS1P23219 599 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 SLC16A2P36021 539 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 ITGA7Q13683 1181 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 TMEM240Q5SV17 173 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 ZNF365Q70YC5 407 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 HIPK3Q9H422 1215 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 ZNF576Q9H609 170 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 PDGFCQ9NRA1 345 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 GNEQ9Y223 722 aaKnown RBP15.33■□□□□ 0.04
SF3B3-202ENST00000562722 ASTN1O14525 1302 aa15.33■□□□□ 0.04
SF3B3-202ENST00000562722 GRXCR1A8MXD5 290 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 ORC4O43929 436 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 IQSEC1Q6DN90 963 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 C16orf59Q7L2K0 433 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 MTIF3Q9H2K0 278 aaKnown RBP15.32■□□□□ 0.04
SF3B3-202ENST00000562722 VTA1Q9NP79 307 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 GPCPD1Q9NPB8 672 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 HELLSQ9NRZ9 838 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 ADD3Q9UEY8 706 aaKnown RBP15.32■□□□□ 0.04
SF3B3-202ENST00000562722 ANAPC4Q9UJX5 808 aa15.32■□□□□ 0.04
SF3B3-202ENST00000562722 FRMPD2Q68DX3 1309 aaPredicted RBP15.32■□□□□ 0.04
SF3B3-202ENST00000562722 PTPDC1A2A3K4 754 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 CD4P01730 458 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 TOP1P11387 765 aaKnown RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 PBX2P40425 430 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 PSMC6P62333 389 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 NKX3-2P78367 333 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 BAATQ14032 418 aaPredicted RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 FAM227BQ96M60 508 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 GAS2L1Q99501 681 aaPredicted RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 PBX4Q9BYU1 374 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
SF3B3-202ENST00000562722 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 MSRAQ9UJ68 235 aa15.31■□□□□ 0.04
SF3B3-202ENST00000562722 CDH23Q9H251 3354 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 CCL23P55773 120 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 ALX1Q15699 326 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 PPM1EQ8WY54 764 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 TMEM47Q9BQJ4 181 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 SALL3Q9BXA9 1300 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
SF3B3-202ENST00000562722 A0A0D9SFI3 127 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 NFIBO00712 420 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 FGAP02671 866 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 FGBP02675 491 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 CALML3P27482 149 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 ALDH5A1P51649 535 aaPredicted RBP15.29■□□□□ 0.04
SF3B3-202ENST00000562722 PDE1AP54750 535 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 HAND2P61296 217 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 RAB30Q15771 203 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 TMEM63BQ5T3F8 832 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 RASIP1Q5U651 963 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 OTOP2Q7RTS6 562 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 SLC43A3Q8NBI5 491 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 CRBNQ96SW2 442 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 SEZ6LQ9BYH1 1024 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 Q9Y3F1 56 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 LRRC37A2A6NM11 1700 aa15.29■□□□□ 0.04
SF3B3-202ENST00000562722 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
SF3B3-202ENST00000562722 UMODL1Q5DID0 1318 aa15.28■□□□□ 0.04
SF3B3-202ENST00000562722 B4GALT4O60513 344 aa15.28■□□□□ 0.04
SF3B3-202ENST00000562722 MYL3P08590 195 aa15.28■□□□□ 0.04
SF3B3-202ENST00000562722 NOVP48745 357 aa15.28■□□□□ 0.04
SF3B3-202ENST00000562722 PDE4DQ08499 809 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms