RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 NEK4P51957 841 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 PPP2R5BQ15173 497 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 CCL14Q16627 93 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 RTN1Q16799 776 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 USH1GQ495M9 461 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 FBXO11Q86XK2 927 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 ANKRD35Q8N283 1001 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 CCDC82Q8N4S0 544 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 CLEC4DQ8WXI8 215 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 FLRT1Q9NZU1 646 aa13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-218ENST00000560777 CENPFP49454 3210 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 GOLGA8AA7E2F4 631 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 GOLGA8BA8MQT2 603 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 NFIBO00712 420 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 IGHA2P01877 340 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 AK2P54819 239 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 FUT2Q10981 343 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 TRIB2Q92519 343 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 ARMC5Q96C12 935 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 APBA2Q99767 749 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-218ENST00000560777 TRIM32Q13049 653 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 TBC1D5Q92609 795 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 RRP36Q96EU6 259 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 ZNF333Q96JL9 665 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 SLC5A4Q9NY91 659 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 DIS3Q9Y2L1 958 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 PCDHA1Q9Y5I3 950 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 ABCB11O95342 1321 aa13.85□□□□□ -0.19
RABGGTA-218ENST00000560777 NID2Q14112 1375 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 CCDC196A0A1B0GTZ2 297 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 hCG_1642624A0A1W2PR95 340 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 BAATQ14032 418 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 NSMFQ6X4W1 530 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 TPCN1Q9ULQ1 816 aa13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 MRPL11Q9Y3B7 192 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-218ENST00000560777 ZNF236Q9UL36 1845 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 OPLAHO14841 1288 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 HMGCRP04035 888 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 INHAP05111 366 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 MTFR1Q15390 333 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 NTRK3Q16288 839 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 FGD4Q96M96 766 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 PFASO15067 1338 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 CNTNAP5Q8WYK1 1306 aa13.83□□□□□ -0.2
RABGGTA-218ENST00000560777 MYH6P13533 1939 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 PTPDC1A2A3K4 754 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 MYCP01106 439 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 CYP2C19P33261 490 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 RPS6P62753 249 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 UBXN2AP68543 259 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 TRAF1Q13077 416 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 STK3Q13188 491 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 RNF207Q6ZRF8 634 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 MAF1Q9H063 256 aa13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-218ENST00000560777 CCDC85CA6NKD9 419 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 PFKFB2O60825 505 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 IFNAR1P17181 557 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 CALML3P27482 149 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 ME3Q16798 604 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 MAMDC4Q6UXC1 1216 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 UNC93B1Q9H1C4 597 aa13.81□□□□□ -0.2
RABGGTA-218ENST00000560777 ASTN1O14525 1302 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms