RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
TPM1-215ENST00000558868 SPICE1Q8N0Z3 855 aa15.67■□□□□ 0.1
TPM1-215ENST00000558868 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
TPM1-215ENST00000558868 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
TPM1-215ENST00000558868 WDR18Q9BV38 432 aa15.67■□□□□ 0.1
TPM1-215ENST00000558868 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 FOSP01100 380 aaPredicted RBP15.66■□□□□ 0.1
TPM1-215ENST00000558868 TXLNAP40222 546 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 CLK2P49760 499 aaKnown RBP15.66■□□□□ 0.1
TPM1-215ENST00000558868 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
TPM1-215ENST00000558868 AP3B2Q13367 1082 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 STX1AQ16623 288 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 DTHD1Q6ZMT9 781 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 KRBA2Q6ZNG9 492 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 C4orf32Q8N8J7 132 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 CNNM3Q8NE01 707 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 ANO10Q9NW15 660 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 PNMA2Q9UL42 364 aa15.66■□□□□ 0.1
TPM1-215ENST00000558868 SCAF8Q9UPN6 1271 aaKnown RBP15.66■□□□□ 0.1
TPM1-215ENST00000558868 VWA3AA6NCI4 1184 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 WNT7AO00755 349 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 KIF3CO14782 793 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 CCNT1O60563 726 aaKnown RBP15.65■□□□□ 0.1
TPM1-215ENST00000558868 GCFC2P16383 781 aaKnown RBP15.65■□□□□ 0.1
TPM1-215ENST00000558868 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 USP50Q70EL3 339 aaPredicted RBP15.65■□□□□ 0.1
TPM1-215ENST00000558868 SULF1Q8IWU6 871 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 FAM200AQ8TCP9 573 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 L3MBTL3Q96JM7 780 aaPredicted RBP15.65■□□□□ 0.1
TPM1-215ENST00000558868 WRNIP1Q96S55 665 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 RANBP17Q9H2T7 1088 aaKnown RBP15.65■□□□□ 0.1
TPM1-215ENST00000558868 KIAA1468Q9P260 1216 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 DOCK1Q14185 1865 aa15.65■□□□□ 0.1
TPM1-215ENST00000558868 NEMFO60524 1076 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 OR52Z1P0C646 297 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 FDX1P10109 184 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 ZYXQ15942 572 aaKnown RBP15.64■□□□□ 0.09
TPM1-215ENST00000558868 KIAA1755Q5JYT7 1200 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
TPM1-215ENST00000558868 PPP4R3AQ6IN85 833 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 RNF214Q8ND24 703 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 ZC3H15Q8WU90 426 aaKnown RBP15.64■□□□□ 0.09
TPM1-215ENST00000558868 KIFC2Q96AC6 838 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 AK8Q96MA6 479 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 NAT10Q9H0A0 1025 aaKnown RBP15.64■□□□□ 0.09
TPM1-215ENST00000558868 TMEM260Q9NX78 707 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 MRPL11Q9Y3B7 192 aaKnown RBP15.64■□□□□ 0.09
TPM1-215ENST00000558868 MRVI1Q9Y6F6 885 aa15.64■□□□□ 0.09
TPM1-215ENST00000558868 C19orf81C9J6K1 198 aa15.63■□□□□ 0.09
TPM1-215ENST00000558868 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
TPM1-215ENST00000558868 INPP5BP32019 993 aa15.63■□□□□ 0.09
TPM1-215ENST00000558868 GRIN1Q05586 938 aa15.63■□□□□ 0.09
TPM1-215ENST00000558868 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
TPM1-215ENST00000558868 PRPF38AQ8NAV1 312 aaKnown RBP15.63■□□□□ 0.09
TPM1-215ENST00000558868 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
TPM1-215ENST00000558868 ABCB11O95342 1321 aa15.63■□□□□ 0.09
TPM1-215ENST00000558868 PTPRAP18433 802 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 USP11P51784 963 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 CCDC173Q0VFZ6 552 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 UBE2SQ16763 222 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 USH1GQ495M9 461 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 LONRF3Q496Y0 759 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 ANO6Q4KMQ2 910 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 MOXD1Q6UVY6 613 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 CEP57L1Q8IYX8 460 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 IQUBQ8NA54 791 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 ZNF280CQ8ND82 737 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 SLF1Q9BQI6 1058 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 GLIS2Q9BZE0 524 aaPredicted RBP15.62■□□□□ 0.09
TPM1-215ENST00000558868 RAB34Q9BZG1 259 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
TPM1-215ENST00000558868 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
TPM1-215ENST00000558868 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 SPDYE3A6NKU9 549 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 PIK3CDO00329 1044 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 PPP1R12BO60237 982 aaPredicted RBP15.61■□□□□ 0.09
TPM1-215ENST00000558868 SLFN14P0C7P3 912 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 NF2P35240 595 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 BACE1P56817 501 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 CALCRLQ16602 461 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 TMEM266Q2M3C6 531 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 ANO3Q9BYT9 981 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 SERTAD1Q9UHV2 236 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 TUBE1Q9UJT0 475 aa15.61■□□□□ 0.09
TPM1-215ENST00000558868 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
TPM1-215ENST00000558868 GLTPD2A6NH11 291 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 MEIS2O14770 477 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 ACTN4O43707 911 aaKnown RBP15.6■□□□□ 0.09
TPM1-215ENST00000558868 SMC2O95347 1197 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 EPHX2P34913 555 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 UBA7P41226 1012 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 ZNF165P49910 485 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 NLRP12P59046 1061 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 SNAP25P60880 206 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 SPP2Q13103 211 aa15.6■□□□□ 0.09
TPM1-215ENST00000558868 MTMR2Q13614 643 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms