RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.77
ATXN3-248ENST00000558190 FGAP02671 866 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ADCY1Q08828 1119 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ARHGAP44Q17R89 818 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ZNF827Q17R98 1081 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ANKRD30AQ9BXX3 1397 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 RNF103-CHMP3A0A140T963 221 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ATP4AP20648 1035 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PHKBQ93100 1093 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CDC25AP30304 524 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PDZD8Q8NEN9 1154 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 IFT122Q9HBG6 1241 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SLC39A2Q9NP94 309 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ADCY3O60266 1144 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SAT1P21673 171 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DPCR1Q3MIW9 517 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 NME8Q8N427 588 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MAP4K1Q92918 833 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 WDR46O15213 610 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ERFP50548 548 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MMEL1Q495T6 779 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DGCR14Q96DF8 476 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 STAP2Q9UGK3 403 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PDE6CP51160 858 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MRPS35P82673 323 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ANO4Q32M45 955 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MAEAQ7L5Y9 396 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DHX40Q8IX18 779 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 TUBGCP2Q9BSJ2 902 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 IYDQ6PHW0 289 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 AGGF1Q8N302 714 aaeCLIP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SUGCTQ9HAC7 445 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 THAP12O43422 761 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 LETM2Q2VYF4 491 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 XAGE3Q8WTP9 111 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 RIN2Q8WYP3 895 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DNAI2Q9GZS0 605 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ESCO1Q5FWF5 840 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GRAMD1CQ8IYS0 662 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DDHD1Q8NEL9 900 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 RRP36Q96EU6 259 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GSTA4O15217 222 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PLS3P13797 630 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CTDSPL2Q05D32 466 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 WDR78Q5VTH9 848 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 HNRNPCL2B2RXH8 293 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 HNRNPCL1O60812 293 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PALMO75781 387 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 AFAP1Q8N556 730 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ZKSCAN4Q969J2 545 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 UBE2TQ9NPD8 197 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GNGT2O14610 69 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GNA11P29992 359 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 NEK2P51955 445 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DCUN1D2Q6PH85 259 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 A0A0G2JND7 137 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 TARSL2A2RTX5 802 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SLC5A1P13866 664 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PECAM1P16284 738 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 POLR2FP61218 127 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CDC37L1Q7L3B6 337 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 NRBF2Q96F24 287 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 EPSTI1Q96J88 318 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MAD1L1Q9Y6D9 718 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PSMC1P62191 440 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 BYSLQ13895 437 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 OTUD6AQ7L8S5 288 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 INPP5DQ92835 1189 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 RHBDL2Q9NX52 303 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 AMOTL2Q9Y2J4 779 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GTPBP6O43824 516 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PPP2R2AP63151 447 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 IFIT1BQ5T764 474 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CLMNQ96JQ2 1002 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 GSDMAQ96QA5 445 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 PDE4BQ07343 736 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CNNM2Q9H8M5 875 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MLXIPQ9HAP2 919 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 TBCAO75347 108 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 JADE1Q6IE81 842 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CAPN12Q6ZSI9 719 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 CNTLNQ9NXG0 1405 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 SFI1A8K8P3 1242 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 BAG3O95817 575 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 EMBQ6PCB8 327 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 MCF2L2Q86YR7 1114 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 ADAMTS1Q9UHI8 967 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 IQSEC3Q9UPP2 1182 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 TULP2O00295 520 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 AFPP02771 609 aaKnown RBP4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DAB2P98082 770 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 BSPRYQ5W0U4 402 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 LINC00301Q8NCQ3 95 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 COG1Q8WTW3 980 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 JDP2Q8WYK2 163 aa4.02□□□□□ -1.77
ATXN3-248ENST00000558190 DARS2Q6PI48 645 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms