RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	FGD4	Q96M96	766 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	GOPC	Q9HD26	462 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	PIH1D3	Q9NQM4	214 aa	Known RBP	11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	SWAP70	Q9UH65	585 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702		Q9Y3F1	56 aa		11.4	□□□□□ -0.58
PABPN1-208	ENST00000557702	TET1	Q8NFU7	2136 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	PROB1	E7EW31	1015 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	RAD21	O60216	631 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	IDH1	O75874	414 aa	Known RBP	11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	GJB5	O95377	273 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	SMPD1	P17405	629 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	ZAP70	P43403	619 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	BFSP2	Q13515	415 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	SMAD2	Q15796	467 aa	Known RBP	11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	FAM83B	Q5T0W9	1011 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	ASCL5	Q7RTU5	278 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	BANK1	Q8NDB2	785 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	MCM9	Q9NXL9	1143 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	FBXO40	Q9UH90	709 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	TRPC6	Q9Y210	931 aa		11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.39	□□□□□ -0.59
PABPN1-208	ENST00000557702	MYO15A	Q9UKN7	3530 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	NCK2	O43639	380 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	KRT37	O76014	449 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	DEFB103A	P81534	67 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	COL19A1	Q14993	1142 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	IQSEC1	Q6DN90	963 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	CPXCR1	Q8N123	301 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	SSH1	Q8WYL5	1049 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	SLF1	Q9BQI6	1058 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	ALG13	Q9NP73	1137 aa	Known RBP	11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	POLR3E	Q9NVU0	708 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	CLDND1	Q9NY35	253 aa		11.38	□□□□□ -0.59
PABPN1-208	ENST00000557702	PARP14	Q460N5	1801 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	SOWAHB	A6NEL2	793 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	ASB14	A6NK59	587 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702		H0Y858	1186 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	ATP2A1	O14983	1001 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	ZBED4	O75132	1171 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	EEF2	P13639	858 aa	Known RBP	11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	AKR1B1	P15121	316 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	PTGS1	P23219	599 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	CNTN2	Q02246	1040 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	TCEAL5	Q5H9L2	206 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	FAM47C	Q5HY64	1035 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	TMED8	Q6PL24	325 aa	Predicted RBP	11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	CHST13	Q8NET6	341 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	CCDC17	Q96LX7	622 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	C17orf80	Q9BSJ5	609 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	FSD1	Q9BTV5	496 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	GPHN	Q9NQX3	736 aa	Predicted RBP	11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	TLR9	Q9NR96	1032 aa		11.37	□□□□□ -0.59
PABPN1-208	ENST00000557702	TPR	P12270	2363 aa	Known RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	MYO7A	Q13402	2215 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	STXBP3	O00186	592 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	AVPR2	P30518	371 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	ZXDA	P98168	799 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	PURA	Q00577	322 aa	Known RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	EVX2	Q03828	476 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	NBPF20	Q3BBV1	942 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	NFRKB	Q6P4R8	1299 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	PRPF38A	Q8NAV1	312 aa	Known RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	MTG1	Q9BT17	334 aa	Predicted RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	NSUN3	Q9H649	340 aa	Known RBP	11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	KANSL2	Q9H9L4	492 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	PDGFC	Q9NRA1	345 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	NOD1	Q9Y239	953 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	INSL6	Q9Y581	213 aa		11.36	□□□□□ -0.59
PABPN1-208	ENST00000557702	PRR23A	A6NEV1	266 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	USP17L12	C9JPN9	530 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	USP17L21	D6R901	530 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	MBTPS2	O43462	519 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	EFCAB14	O75071	495 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	MYL3	P08590	195 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	NUBP1	P53384	320 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	VCP	P55072	806 aa	Known RBP	11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	MTX1	Q13505	466 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	CLUL1	Q15846	466 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	FAM117B	Q6P1L5	589 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	CNKSR3	Q6P9H4	555 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	EEPD1	Q7L9B9	569 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	RPAIN	Q86UA6	219 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	DYNLL2	Q96FJ2	89 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	SAMD11	Q96NU1	681 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	MEIS3	Q99687	375 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	DBNDD2	Q9BQY9	259 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	RIOK1	Q9BRS2	568 aa	Known RBP	11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	RAVER2	Q9HCJ3	691 aa	Known RBP	11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	SI	P14410	1827 aa		11.35	□□□□□ -0.59
PABPN1-208	ENST00000557702	MAGEB6P1	A0A0J9YX57	407 aa		11.34	□□□□□ -0.59
PABPN1-208	ENST00000557702	PARN	O95453	639 aa	Known RBP	11.34	□□□□□ -0.59
PABPN1-208	ENST00000557702	LTBR	P36941	435 aa		11.34	□□□□□ -0.59
PABPN1-208	ENST00000557702	CPT1A	P50416	773 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms