RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FANCCQ00597 558 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 CERKLQ49MI3 558 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 ZSCAN25Q6NSZ9 544 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 RAET1EQ8TD07 263 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 RNF34Q969K3 372 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 FAM129BQ96TA1 746 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-228ENST00000557033 LOC285556D6RIA3 1793 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 RBBP6Q7Z6E9 1792 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 TLL1O43897 1013 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 GDF11O95390 407 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 PLCD1P51178 756 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 EPHA4P54764 986 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 WNT2BQ93097 391 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 GPATCH3Q96I76 525 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 KCTD15Q96SI1 283 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 CABP5Q9NP86 173 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 MGAMO43451 1857 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 MYPNQ86TC9 1320 aa11.8□□□□□ -0.52
HNRNPC-228ENST00000557033 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 GH2P01242 217 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 GRK4P32298 578 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 GABPAQ06546 454 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 AAMPQ13685 434 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 SLC4A8Q2Y0W8 1093 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 LCORLQ8N3X6 602 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 ALKBH8Q96BT7 664 aaKnown RBP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 STIM2Q9P246 746 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 HTTP42858 3142 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
HNRNPC-228ENST00000557033 A0A1W2PRU2 124 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 SHMT1P34896 483 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 USP14P54578 494 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 EMP3P54852 163 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 GDF10P55107 478 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 RAB15P59190 212 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 IRX3P78415 501 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 PRKCZQ05513 592 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 PSMD2Q13200 908 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 COX20Q5RI15 118 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 SDR42E1Q8WUS8 393 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 COA7Q96BR5 231 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 ARMT1Q9H993 441 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 SWAP70Q9UH65 585 aa11.78□□□□□ -0.52
HNRNPC-228ENST00000557033 ERVH48-1M5A8F1 160 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 TNFRSF10BO14763 440 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 GPR182O15218 404 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 MBD4O95243 580 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 CAPN2P17655 700 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 FLT3LGP49771 235 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 UBXN2AP68543 259 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 SHROOM1Q2M3G4 852 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 AMOTL1Q8IY63 956 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 GPRC5AQ8NFJ5 357 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 P2RX7Q99572 595 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 SLC6A16Q9GZN6 736 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 VTI1BQ9UEU0 232 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 GABRQQ9UN88 632 aa11.77□□□□□ -0.53
HNRNPC-228ENST00000557033 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 PRKAB2O43741 272 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 ADCY3O60266 1144 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 INHAP05111 366 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 HERVK_113P62684 666 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 FEZ1Q99689 392 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 TTC41PQ6P2S7 1318 aa11.76□□□□□ -0.53
HNRNPC-228ENST00000557033 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 NAV1Q8NEY1 1877 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 ERC2O15083 957 aa11.75□□□□□ -0.53
HNRNPC-228ENST00000557033 GJB1P08034 283 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms