RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 AOC3Q16853 763 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 ZCRB1Q8TBF4 217 aaKnown RBP5.67□□□□□ -1.5
VTI1B-203ENST00000554636 GIPC2Q8TF65 315 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 HRASLS5Q96KN8 279 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 PRDM5Q9NQX1 630 aaPredicted RBP5.67□□□□□ -1.5
VTI1B-203ENST00000554636 GTF2IRD1Q9UHL9 959 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 PLAGL2Q9UPG8 496 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 SNCAIPQ9Y6H5 919 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 TUBGCP6Q96RT7 1819 aa5.67□□□□□ -1.5
VTI1B-203ENST00000554636 QSER1Q2KHR3 1735 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 GNAT3A8MTJ3 354 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 LRIG2O94898 1065 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 SLITRK5O94991 958 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 EOMESO95936 686 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 PGRP06401 933 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 ST13P50502 369 aaKnown RBP5.66□□□□□ -1.5
VTI1B-203ENST00000554636 FAM160A1Q05DH4 1040 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 TXNRD1Q16881 649 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 BNC2Q6ZN30 1099 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-203ENST00000554636 WFDC3Q8IUB2 231 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 HID1Q8IV36 788 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 STK11IPQ8N1F8 1099 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 AGBL5Q8NDL9 886 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 FOXQ1Q9C009 403 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 ITGB4P16144 1822 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 IGSF1Q8N6C5 1336 aa5.66□□□□□ -1.5
VTI1B-203ENST00000554636 MINDY4BA8MYZ0 360 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 PRR33A8MZF0 331 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 GFRA2O00451 464 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 PPM1GO15355 546 aaPredicted RBP5.65□□□□□ -1.5
VTI1B-203ENST00000554636 GBP2P32456 591 aaPredicted RBP5.65□□□□□ -1.5
VTI1B-203ENST00000554636 TNNT2P45379 298 aaPredicted RBP5.65□□□□□ -1.5
VTI1B-203ENST00000554636 EIF4A2Q14240 407 aaKnown RBP5.65□□□□□ -1.5
VTI1B-203ENST00000554636 TSNAXIP1Q2TAA8 658 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 RIN3Q8TB24 985 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 RAPGEF4Q8WZA2 1011 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 MISP3Q96FF7 219 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 NOC4LQ9BVI4 516 aaKnown RBP5.65□□□□□ -1.5
VTI1B-203ENST00000554636 PRDM7Q9NQW5 492 aa5.65□□□□□ -1.5
VTI1B-203ENST00000554636 PCDH11XQ9BZA7 1347 aa5.65□□□□□ -1.51
VTI1B-203ENST00000554636 PCDH11YQ9BZA8 1340 aa5.65□□□□□ -1.51
VTI1B-203ENST00000554636 CNTNAP4Q9C0A0 1308 aa5.65□□□□□ -1.51
VTI1B-203ENST00000554636 PLEKHG2Q9H7P9 1386 aa5.65□□□□□ -1.51
VTI1B-203ENST00000554636 TMEM265A0A087WTH1 108 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 CYP27B1O15528 508 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 PAX4O43316 350 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 BPNT1O95861 308 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 CBX7O95931 251 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 PF4P02776 101 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 RLBP1P12271 317 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 ERCC3P19447 782 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 PRKCQQ04759 706 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 ZNF827Q17R98 1081 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 ZNF792Q3KQV3 632 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 LETMD1Q6P1Q0 360 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 FAM214BQ7L5A3 538 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 SPACA3Q8IXA5 215 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 PDGFDQ9GZP0 370 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-203ENST00000554636 MKNK2Q9HBH9 465 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 TJP2Q9UDY2 1190 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 VAV3Q9UKW4 847 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 CORINQ9Y5Q5 1042 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 NPC1L1Q9UHC9 1359 aa5.64□□□□□ -1.51
VTI1B-203ENST00000554636 COL3A1P02461 1466 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-203ENST00000554636 COL24A1Q17RW2 1714 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 TAF1LQ8IZX4 1826 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 FAM155AB1AL88 458 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-203ENST00000554636 F13A1P00488 732 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 RPL6Q02878 288 aaKnown RBP5.63□□□□□ -1.51
VTI1B-203ENST00000554636 IKZF1Q13422 519 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 CAMK2GQ13555 558 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-203ENST00000554636 SLC15A2Q16348 729 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 NKPD1Q17RQ9 610 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 SNAP47Q5SQN1 464 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 TMCO4Q5TGY1 634 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 CDKAL1Q5VV42 579 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 CDH24Q86UP0 819 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 MORC1Q86VD1 984 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 RELL1Q8IUW5 271 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 TMEM87BQ96K49 555 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 STK32BQ9NY57 414 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 ADAMTS6Q9UKP5 1117 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 MAPK8IP1Q9UQF2 711 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 KNSTRNQ9Y448 316 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 KDRP35968 1356 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 C5P01031 1676 aa5.63□□□□□ -1.51
VTI1B-203ENST00000554636 IGF2BP3O00425 579 aaKnown RBP eCLIP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 GRIN3BO60391 1043 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 PHKG2P15735 406 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 IL13P35225 146 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 PDE4BQ07343 736 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 SFRP5Q5T4F7 317 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 ANGEL2Q5VTE6 544 aaKnown RBP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 DIEXFQ68CQ4 756 aaKnown RBP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 MFSD4AQ8N468 514 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 MFSD2AQ8NA29 543 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 PI4K2BQ8TCG2 481 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms