RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 EEPD1Q7L9B9 569 aa21.01■□□□□ 0.95
PNN-202ENST00000553331 UBAC1Q9BSL1 405 aa21.01■□□□□ 0.95
PNN-202ENST00000553331 CNNM2Q9H8M5 875 aa21.01■□□□□ 0.95
PNN-202ENST00000553331 TNKSO95271 1327 aa21.01■□□□□ 0.95
PNN-202ENST00000553331 RAD50Q92878 1312 aa21.01■□□□□ 0.95
PNN-202ENST00000553331 A0A1W2PQ45 241 aaPredicted RBP21■□□□□ 0.95
PNN-202ENST00000553331 A0A1W2PQY0 241 aa21■□□□□ 0.95
PNN-202ENST00000553331 MYADML2A6NDP7 307 aa21■□□□□ 0.95
PNN-202ENST00000553331 SOX1O00570 391 aaPredicted RBP21■□□□□ 0.95
PNN-202ENST00000553331 NFIBO00712 420 aa21■□□□□ 0.95
PNN-202ENST00000553331 DUSP11O75319 330 aaKnown RBP21■□□□□ 0.95
PNN-202ENST00000553331 C6orf222P0C671 652 aaPredicted RBP21■□□□□ 0.95
PNN-202ENST00000553331 SNHG28P0DPA3 235 aa21■□□□□ 0.95
PNN-202ENST00000553331 PTH1RQ03431 593 aa21■□□□□ 0.95
PNN-202ENST00000553331 BAATQ14032 418 aaPredicted RBP21■□□□□ 0.95
PNN-202ENST00000553331 KCNA10Q16322 511 aa21■□□□□ 0.95
PNN-202ENST00000553331 ENAHQ8N8S7 591 aaPredicted RBP21■□□□□ 0.95
PNN-202ENST00000553331 SPC25Q9HBM1 224 aa21■□□□□ 0.95
PNN-202ENST00000553331 CALML3P27482 149 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 ACLYP53396 1101 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 USH1GQ495M9 461 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 GPATCH4Q5T3I0 446 aaKnown RBP20.99■□□□□ 0.95
PNN-202ENST00000553331 VTI1AQ96AJ9 217 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 LCTP09848 1927 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 ASTN1O14525 1302 aa20.99■□□□□ 0.95
PNN-202ENST00000553331 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.98■□□□□ 0.95
PNN-202ENST00000553331 DHX16O60231 1041 aaKnown RBP20.98■□□□□ 0.95
PNN-202ENST00000553331 NT5C2P49902 561 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 TNFAIP2Q03169 654 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 TLE2Q04725 743 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 TRDNQ13061 729 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 SNX17Q15036 470 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 FBXO16Q8IX29 292 aaPredicted RBP20.98■□□□□ 0.95
PNN-202ENST00000553331 TDHQ8IZJ6 230 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 KLHDC9Q8NEP7 349 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 LRCH3Q96II8 777 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 TSEN34Q9BSV6 310 aaKnown RBP20.98■□□□□ 0.95
PNN-202ENST00000553331 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 STARD7Q9NQZ5 370 aa20.98■□□□□ 0.95
PNN-202ENST00000553331 PQBP1O60828 265 aaKnown RBP20.97■□□□□ 0.95
PNN-202ENST00000553331 GNASQ5JWF2 1037 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 IFIT1BQ5T764 474 aaKnown RBP20.97■□□□□ 0.95
PNN-202ENST00000553331 SLC30A10Q6XR72 485 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 CYB5R4Q7L1T6 521 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 VAT1LQ9HCJ6 419 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 PDGFCQ9NRA1 345 aa20.97■□□□□ 0.95
PNN-202ENST00000553331 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
PNN-202ENST00000553331 BEX3Q00994 111 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 RNF207Q6ZRF8 634 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 SH3RF1Q7Z6J0 888 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 CLEC4DQ8WXI8 215 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 PDLIM7Q9NR12 457 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 ADD3Q9UEY8 706 aaKnown RBP20.96■□□□□ 0.95
PNN-202ENST00000553331 PNMA2Q9UL42 364 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 U3KPZ7 1027 aaPredicted RBP20.96■□□□□ 0.95
PNN-202ENST00000553331 MYH6P13533 1939 aa20.96■□□□□ 0.95
PNN-202ENST00000553331 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 LTBP2Q14767 1821 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 MOXD2PA6NHM9 499 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 SGSM2O43147 1006 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 ASGR1P07306 291 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 CYP21A2P08686 494 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 PTGS1P23219 599 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 ALDH5A1P51649 535 aaPredicted RBP20.95■□□□□ 0.94
PNN-202ENST00000553331 GJA9P57773 515 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 CDC37Q16543 378 aaPredicted RBP20.95■□□□□ 0.94
PNN-202ENST00000553331 ASPRV1Q53RT3 343 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 ADGRF4Q8IZF3 695 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 PCSK9Q8NBP7 692 aaKnown RBP20.95■□□□□ 0.94
PNN-202ENST00000553331 DNAH12Q6ZR08 3092 aa20.95■□□□□ 0.94
PNN-202ENST00000553331 TRIM43BA6NCK2 446 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 NEFLP07196 543 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 C1orf53Q5VUE5 145 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 CCSAPQ6IQ19 270 aaPredicted RBP20.94■□□□□ 0.94
PNN-202ENST00000553331 KIAA1211Q6ZU35 1233 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 CENPQQ7L2Z9 268 aaPredicted RBP20.94■□□□□ 0.94
PNN-202ENST00000553331 BADQ92934 168 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 TRIM43Q96BQ3 446 aaPredicted RBP20.94■□□□□ 0.94
PNN-202ENST00000553331 GLT1D1Q96MS3 346 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 AP5M1Q9H0R1 490 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 UPF3AQ9H1J1 476 aaKnown RBP20.94■□□□□ 0.94
PNN-202ENST00000553331 WDR19Q8NEZ3 1342 aa20.94■□□□□ 0.94
PNN-202ENST00000553331 DYNC1LI2O43237 492 aaPredicted RBP20.93■□□□□ 0.94
PNN-202ENST00000553331 CLTBP09497 229 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 SMPD1P17405 629 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 CST5P28325 142 aaPredicted RBP20.93■□□□□ 0.94
PNN-202ENST00000553331 TAPT1Q6NXT6 567 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 CHST3Q7LGC8 479 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 RALYLQ86SE5 291 aaKnown RBP20.93■□□□□ 0.94
PNN-202ENST00000553331 TLK2Q86UE8 772 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 TAF6LQ9Y6J9 622 aa20.93■□□□□ 0.94
PNN-202ENST00000553331 E7EWF7 191 aa20.92■□□□□ 0.94
PNN-202ENST00000553331 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
PNN-202ENST00000553331 RPS6P62753 249 aaKnown RBP20.92■□□□□ 0.94
PNN-202ENST00000553331 SEC23AQ15436 765 aa20.92■□□□□ 0.94
PNN-202ENST00000553331 TMEM63BQ5T3F8 832 aa20.92■□□□□ 0.94
PNN-202ENST00000553331 IQSEC1Q6DN90 963 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms