RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 OSBPL3Q9H4L5 887 aa18.3■□□□□ 0.52
BRF1-220ENST00000552127 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
BRF1-220ENST00000552127 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
BRF1-220ENST00000552127 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
BRF1-220ENST00000552127 TLR3O15455 904 aaKnown RBP18.29■□□□□ 0.52
BRF1-220ENST00000552127 RAD21O60216 631 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 ASGR1P07306 291 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 UIMC1Q96RL1 719 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 CERS4Q9HA82 394 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 DIS3Q9Y2L1 958 aaKnown RBP18.29■□□□□ 0.52
BRF1-220ENST00000552127 SLC4A7Q9Y6M7 1214 aa18.29■□□□□ 0.52
BRF1-220ENST00000552127 UMODL1Q5DID0 1318 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 EPOPA6NHQ4 379 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 CD4P01730 458 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 CST5P28325 142 aaPredicted RBP18.28■□□□□ 0.52
BRF1-220ENST00000552127 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
BRF1-220ENST00000552127 MCMDC2Q4G0Z9 681 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
BRF1-220ENST00000552127 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
BRF1-220ENST00000552127 SLC25A27O95847 323 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 CA3P07451 260 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 C6orf222P0C671 652 aaPredicted RBP18.27■□□□□ 0.52
BRF1-220ENST00000552127 TSPY3P0CV98 308 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 TSPY8P0CW00 308 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
BRF1-220ENST00000552127 KCTD2Q14681 263 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 TMEM132BQ14DG7 1078 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 PCSK9Q8NBP7 692 aaKnown RBP18.27■□□□□ 0.52
BRF1-220ENST00000552127 NEDD1Q8NHV4 660 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 HIPK3Q9H422 1215 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 FBXO28Q9NVF7 368 aa18.27■□□□□ 0.52
BRF1-220ENST00000552127 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
BRF1-220ENST00000552127 ZMYM6O95789 1325 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 DUSP11O75319 330 aaKnown RBP18.26■□□□□ 0.51
BRF1-220ENST00000552127 NDUFB10O96000 172 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 ATP2A2P16615 1042 aaKnown RBP18.26■□□□□ 0.51
BRF1-220ENST00000552127 CCL23P55773 120 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 CTDSPL2Q05D32 466 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 ALX1Q15699 326 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
BRF1-220ENST00000552127 FBXL18Q96ME1 805 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 ANAPC4Q9UJX5 808 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 SYNPO2Q9UMS6 1093 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 ADAMTS5Q9UNA0 930 aa18.26■□□□□ 0.51
BRF1-220ENST00000552127 USP34Q70CQ2 3546 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 BRWD1Q9NSI6 2320 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 ZBBXA8MT70 800 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 F5H6K3 240 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 TTLL1O95922 423 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 TFAP4Q01664 338 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 KLRC3Q07444 240 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 MKL1Q969V6 931 aa18.25■□□□□ 0.51
BRF1-220ENST00000552127 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
BRF1-220ENST00000552127 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
BRF1-220ENST00000552127 ADCY6O43306 1168 aa18.24■□□□□ 0.51
BRF1-220ENST00000552127 SNAI1O95863 264 aaPredicted RBP18.24■□□□□ 0.51
BRF1-220ENST00000552127 SDSP20132 328 aa18.24■□□□□ 0.51
BRF1-220ENST00000552127 LRRC47Q8N1G4 583 aaKnown RBP18.24■□□□□ 0.51
BRF1-220ENST00000552127 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
BRF1-220ENST00000552127 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
BRF1-220ENST00000552127 VWA5AO00534 786 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
BRF1-220ENST00000552127 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
BRF1-220ENST00000552127 CSPP1Q1MSJ5 1256 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 RIOX2Q8IUF8 465 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 GJD3Q8N144 294 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 ARNTL2Q8WYA1 636 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 VWCEQ96DN2 955 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 WNT8AQ9H1J5 351 aa18.23■□□□□ 0.51
BRF1-220ENST00000552127 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 ORC4O43929 436 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 FGAP02671 866 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 GJA9P57773 515 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 RPUSD2Q8IZ73 545 aaKnown RBP18.22■□□□□ 0.51
BRF1-220ENST00000552127 MSL3Q8N5Y2 521 aaKnown RBP18.22■□□□□ 0.51
BRF1-220ENST00000552127 REPS2Q8NFH8 660 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 UPF3AQ9H1J1 476 aaKnown RBP18.22■□□□□ 0.51
BRF1-220ENST00000552127 KCNH6Q9H252 994 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 SPC25Q9HBM1 224 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 INCENPQ9NQS7 918 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
BRF1-220ENST00000552127 ZNF214Q9UL59 606 aaPredicted RBP18.22■□□□□ 0.51
BRF1-220ENST00000552127 HIP1O00291 1037 aa18.21■□□□□ 0.51
BRF1-220ENST00000552127 RANBP6O60518 1105 aaKnown RBP18.21■□□□□ 0.51
BRF1-220ENST00000552127 PDE4AP27815 886 aa18.21■□□□□ 0.51
BRF1-220ENST00000552127 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
BRF1-220ENST00000552127 COL4A4P53420 1690 aaPredicted RBP18.2■□□□□ 0.5
BRF1-220ENST00000552127 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms