RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.1■□□□□ 0.81
CHMP1A-208ENST00000550102 DNAH12Q6ZR08 3092 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 KBTBD13C9JR72 458 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 SNAI1O95863 264 aaPredicted RBP20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 ZNF865P0CJ78 1059 aaPredicted RBP20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 RARBP10826 455 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 COL6A1P12109 1028 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 GRM4Q14833 912 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 USH1GQ495M9 461 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 CATIPQ7Z7H3 387 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 ARRDC4Q8NCT1 418 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 SENP2Q9HC62 589 aa20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 ZHX1Q9UKY1 873 aaPredicted RBP20.09■□□□□ 0.81
CHMP1A-208ENST00000550102 ABCB11O95342 1321 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 SOWAHBA6NEL2 793 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 ASB14A6NK59 587 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 KLRF2D3W0D1 207 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 EVI5O60447 810 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 CCDC144CPQ8IYA2 1237 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 STAG2Q8N3U4 1231 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 IGDCC4Q8TDY8 1250 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 TMEM87BQ96K49 555 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 ABHD16BQ9H3Z7 469 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 LY9Q9HBG7 655 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 XPNPEP3Q9NQH7 507 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 NR2E3Q9Y5X4 410 aa20.08■□□□□ 0.81
CHMP1A-208ENST00000550102 ASTN1O14525 1302 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 PALM3A6NDB9 673 aaPredicted RBP20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 ACVR2BQ13705 512 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 BAATQ14032 418 aaPredicted RBP20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 JMJD4Q9H9V9 463 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 ADD3Q9UEY8 706 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 FAM184BQ9ULE4 1060 aa20.07■□□□□ 0.8
CHMP1A-208ENST00000550102 H0YGN5 161 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 DDAH1O94760 285 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 TROAPQ12815 778 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
CHMP1A-208ENST00000550102 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 SH2B2O14492 632 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 LRRC41Q15345 812 aa20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 VAT1LQ9HCJ6 419 aa20.05■□□□□ 0.8
CHMP1A-208ENST00000550102 SYNRGQ9UMZ2 1314 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 KIAA1217Q5T5P2 1943 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 REC8O95072 547 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 CALML3P27482 149 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 ALDH5A1P51649 535 aaPredicted RBP20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 KRT32Q14532 448 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 CCDC144BQ3MJ40 725 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 RNF180Q86T96 592 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 C7orf61Q8IZ16 206 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 TMTC2Q8N394 836 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 NUP133Q8WUM0 1156 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 MTMR8Q96EF0 704 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 MAP3K14Q99558 947 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 MAF1Q9H063 256 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 KATNBL1Q9H079 304 aa20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
CHMP1A-208ENST00000550102 CCDC69A6NI79 296 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 ZBTB5O15062 677 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 PGK1P00558 417 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 KIF5BP33176 963 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 LIFRP42702 1097 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 RPS6P62753 249 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 RGS22Q8NE09 1264 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 PURBQ96QR8 312 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 MPHOSPH6Q99547 160 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 AMNQ9BXJ7 453 aa20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 SENP6Q9GZR1 1112 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 MRPL11Q9Y3B7 192 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-208ENST00000550102 DUSP11O75319 330 aaKnown RBP20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 TRAF1Q13077 416 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 TSGA10IPQ3SY00 556 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 HOMER1Q86YM7 354 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 MORC4Q8TE76 937 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 NEK1Q96PY6 1258 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 MYL10Q9BUA6 226 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 VTA1Q9NP79 307 aa20.02■□□□□ 0.8
CHMP1A-208ENST00000550102 ADAMTS4O75173 837 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 CALM1P0DP23 149 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 CALM2P0DP24 149 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 CALM3P0DP25 149 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 LRRC26Q2I0M4 334 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 FBXO16Q8IX29 292 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-208ENST00000550102 RASEFQ8IZ41 740 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms