RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GOPCQ9HD26 462 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 TMEM232C9JQI7 657 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 PPP1R12BO60237 982 aaPredicted RBP9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 NF2P35240 595 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 SPP2Q13103 211 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 MTMR2Q13614 643 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 SYDE2Q5VT97 1194 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 MCTP1Q6DN14 999 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 HOMER1Q86YM7 354 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 RRP36Q96EU6 259 aaKnown RBP9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 FEZ1Q99689 392 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 ZBED2Q9BTP6 218 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 ZSCAN16Q9H4T2 348 aaPredicted RBP9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 SH2D4AQ9H788 454 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 ISY1Q9ULR0 285 aaKnown RBP9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 AFG3L2Q9Y4W6 797 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 MYH7BA7E2Y1 1941 aa9.33□□□□□ -0.92
DEPDC4-207ENST00000549249 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 WDR46O15213 610 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 RGS20O76081 388 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 VCAM1P19320 739 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 U2AF2P26368 475 aaKnown RBP eCLIP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 IREB2P48200 963 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 BACE1P56817 501 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 SNAP25P60880 206 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 NR5A1Q13285 461 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 TRIM29Q14134 588 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 QRICH1Q2TAL8 776 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 NOM1Q5C9Z4 860 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 LDLRAD1Q5T700 205 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 HEATR3Q7Z4Q2 680 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 COA7Q96BR5 231 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 C12orf42Q96LP6 360 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 GBP4Q96PP9 640 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 FTOQ9C0B1 505 aaKnown RBP eCLIP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 ELP3Q9H9T3 547 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 BARHL2Q9NY43 387 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 PRR12Q9ULL5 1215 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 CNPY2Q9Y2B0 182 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 ZHX2Q9Y6X8 837 aa9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 RBBP6Q7Z6E9 1792 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-207ENST00000549249 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 M0R2N6 131 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ZBTB5O15062 677 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 PLA2G6O60733 806 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 XBP1P17861 261 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 GJA5P36382 358 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 STAT2P52630 851 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 USP14P54578 494 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 HMGCS2P54868 508 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 NLRP5P59047 1200 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 EARS2Q5JPH6 523 aaKnown RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ARMC9Q7Z3E5 817 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 DAGLBQ8NCG7 672 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 LPAR1Q92633 364 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 FOXP1Q9H334 677 aaPredicted RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ZNF408Q9H9D4 720 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ATP6V1DQ9Y5K8 247 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 CSADQ9Y600 493 aa9.31□□□□□ -0.92
DEPDC4-207ENST00000549249 ESYT2A0FGR8 921 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 C19orf81C9J6K1 198 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 hCG_1984214I3L0E3 225 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 ITGBL1O95965 494 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 OSBPP22059 807 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 KRT2P35908 639 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 CTCFP49711 727 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 NAPAP54920 295 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 IKQ13123 557 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 PROX2Q3B8N5 592 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 BRAPQ7Z569 592 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 FAM160B2Q86V87 743 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 BLIDQ8IZY5 108 aa9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 ZNF713Q8N859 430 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-207ENST00000549249 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms