RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNFX1Q9P2E3 1918 aaKnown RBP18.85■□□□□ 0.61
LIMS2-217ENST00000545738 K7ELQ4 463 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-217ENST00000545738 PFKFB3Q16875 520 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-217ENST00000545738 SMARCC2Q8TAQ2 1214 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 PCDHA1Q9Y5I3 950 aa18.84■□□□□ 0.61
LIMS2-217ENST00000545738 RBBP6Q7Z6E9 1792 aaKnown RBP18.84■□□□□ 0.61
LIMS2-217ENST00000545738 LBX1P52954 281 aa18.83■□□□□ 0.61
LIMS2-217ENST00000545738 CUL4AQ13619 759 aa18.83■□□□□ 0.61
LIMS2-217ENST00000545738 GPR142Q7Z601 462 aa18.83■□□□□ 0.61
LIMS2-217ENST00000545738 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.61
LIMS2-217ENST00000545738 STXBP3O00186 592 aa18.83■□□□□ 0.6
LIMS2-217ENST00000545738 SCG2P13521 617 aa18.83■□□□□ 0.6
LIMS2-217ENST00000545738 PSMC4P43686 418 aa18.83■□□□□ 0.6
LIMS2-217ENST00000545738 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
LIMS2-217ENST00000545738 HEATR3Q7Z4Q2 680 aa18.83■□□□□ 0.6
LIMS2-217ENST00000545738 SHCBP1Q8NEM2 672 aa18.83■□□□□ 0.6
LIMS2-217ENST00000545738 PURBQ96QR8 312 aaKnown RBP18.83■□□□□ 0.6
LIMS2-217ENST00000545738 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
LIMS2-217ENST00000545738 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
LIMS2-217ENST00000545738 FKTNO75072 461 aa18.82■□□□□ 0.6
LIMS2-217ENST00000545738 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
LIMS2-217ENST00000545738 A1CFQ9NQ94 594 aaKnown RBP18.82■□□□□ 0.6
LIMS2-217ENST00000545738 SLC25A27O95847 323 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 CCNA1P78396 465 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 BARHL2Q9NY43 387 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 VPS54Q9P1Q0 977 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 ORC3Q9UBD5 711 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-217ENST00000545738 GABRQQ9UN88 632 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 ZNF236Q9UL36 1845 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 ASTN1O14525 1302 aa18.81■□□□□ 0.6
LIMS2-217ENST00000545738 SLC30A10Q6XR72 485 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 ACAD9Q9H845 621 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 GJD2Q9UKL4 321 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 ABCB11O95342 1321 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 CDKL5O76039 1030 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 DEXIO95424 95 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 PGK2P07205 417 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 MAPK4P31152 587 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 GRB14Q14449 540 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 NPY5RQ15761 445 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 CPLX2Q6PUV4 134 aaKnown RBP18.8■□□□□ 0.6
LIMS2-217ENST00000545738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIMS2-217ENST00000545738 TRIM22Q8IYM9 498 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 CHST13Q8NET6 341 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 LLPHQ9BRT6 129 aaKnown RBP18.8■□□□□ 0.6
LIMS2-217ENST00000545738 MROH8Q9H579 483 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 FOXD4L1Q9NU39 408 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 COL20A1Q9P218 1284 aa18.8■□□□□ 0.6
LIMS2-217ENST00000545738 DDX49Q9Y6V7 483 aaKnown RBP18.8■□□□□ 0.6
LIMS2-217ENST00000545738 PLXNA1Q9UIW2 1896 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 TNPO2O14787 897 aaKnown RBP18.79■□□□□ 0.6
LIMS2-217ENST00000545738 COBLO75128 1261 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 PTPREP23469 700 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 MORN1Q5T089 497 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 HSCBQ8IWL3 235 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 USP6NLQ92738 828 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 FGD4Q96M96 766 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 CYP39A1Q9NYL5 469 aa18.79■□□□□ 0.6
LIMS2-217ENST00000545738 ADORA2AP29274 412 aa18.78■□□□□ 0.6
LIMS2-217ENST00000545738 FOSBP53539 338 aa18.78■□□□□ 0.6
LIMS2-217ENST00000545738 PRKCZQ05513 592 aa18.78■□□□□ 0.6
LIMS2-217ENST00000545738 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
LIMS2-217ENST00000545738 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
LIMS2-217ENST00000545738 DNAJC25-GNG10A0A024R161 153 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 MEIS2O14770 477 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 HOXA13P31271 388 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-217ENST00000545738 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-217ENST00000545738 FCGRTP55899 365 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
LIMS2-217ENST00000545738 CNTN2Q02246 1040 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 BAATQ14032 418 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-217ENST00000545738 USP17L6PQ6QN14 398 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 MMP19Q99542 508 aa18.77■□□□□ 0.6
LIMS2-217ENST00000545738 NAPAP54920 295 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 AKAP17AQ02040 695 aaKnown RBP18.77■□□□□ 0.59
LIMS2-217ENST00000545738 GHRHRQ02643 423 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 UBE2SQ16763 222 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 OTOP1Q7RTM1 612 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 ERO1AQ96HE7 468 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 ALG1Q9BT22 464 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 RBM27Q9P2N5 1060 aaKnown RBP18.77■□□□□ 0.59
LIMS2-217ENST00000545738 KCNJ14Q9UNX9 436 aa18.77■□□□□ 0.59
LIMS2-217ENST00000545738 MRPL11Q9Y3B7 192 aaKnown RBP18.77■□□□□ 0.59
LIMS2-217ENST00000545738 MCM3APO60318 1980 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 CFBP00751 764 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 FCER1AP12319 257 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 GJB2P29033 226 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 COPB2P35606 906 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 HSD17B4P51659 736 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 CCAR1Q8IX12 1150 aaKnown RBP18.76■□□□□ 0.59
LIMS2-217ENST00000545738 ANKRD35Q8N283 1001 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 NPLOC4Q8TAT6 608 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 FBXO40Q9UH90 709 aa18.76■□□□□ 0.59
LIMS2-217ENST00000545738 FLT3LGP49771 235 aa18.75■□□□□ 0.59
LIMS2-217ENST00000545738 FAM133AQ8N9E0 248 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms