RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 GALNT17Q6IS24 598 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 TYW1BQ6NUM6 668 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 ABRAQ8N0Z2 381 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 CPXCR1Q8N123 301 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 ANKRD13CQ8N6S4 541 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 FBXO18Q8NFZ0 1043 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 SMCR8Q8TEV9 937 aaPredicted RBP6.77□□□□□ -1.33
ABCF1-207ENST00000542772 TBC1D5Q92609 795 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 TRERF1Q96PN7 1200 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 PHF20Q9BVI0 1012 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 SEC63Q9UGP8 760 aaKnown RBP6.77□□□□□ -1.33
ABCF1-207ENST00000542772 SMC3Q9UQE7 1217 aa6.77□□□□□ -1.33
ABCF1-207ENST00000542772 MRPL11Q9Y3B7 192 aaKnown RBP6.77□□□□□ -1.33
ABCF1-207ENST00000542772 ZNFX1Q9P2E3 1918 aaKnown RBP6.77□□□□□ -1.33
ABCF1-207ENST00000542772 CEP350Q5VT06 3117 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 DNAJC25-GNG10A0A024R161 153 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 SMCO2A6NFE2 343 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 GPR25O00155 361 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 DTNBO60941 627 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 IGHA2P01877 340 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 XBP1P17861 261 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 ERCC3P19447 782 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 PTPREP23469 700 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 GNA11P29992 359 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 MAPK4P31152 587 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 ANP32AP39687 249 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 HSD17B4P51659 736 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 MRPL12P52815 198 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 SP3Q02447 781 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 MUM1L1Q5H9M0 696 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 MCTP2Q6DN12 878 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 SNRNP48Q6IEG0 339 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 CCDC174Q6PII3 467 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 DAGLBQ8NCG7 672 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 CCDC12Q8WUD4 166 aaPredicted RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 USP6NLQ92738 828 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 AIFM3Q96NN9 605 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 IPO9Q96P70 1041 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 ALG1Q9BT22 464 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 GLT8D2Q9H1C3 349 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 PORCNQ9H237 461 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 PSTPIP2Q9H939 334 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 RIC8AQ9NPQ8 531 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 GJB4Q9NTQ9 266 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 FBXO40Q9UH90 709 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 CPA4Q9UI42 421 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 GJD2Q9UKL4 321 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 CCPG1Q9ULG6 757 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 DIS3Q9Y2L1 958 aaKnown RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 KIF3AQ9Y496 699 aa6.76□□□□□ -1.33
ABCF1-207ENST00000542772 CTDP1Q9Y5B0 961 aaPredicted RBP6.76□□□□□ -1.33
ABCF1-207ENST00000542772 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 ADAMTS3O15072 1205 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PPFIA3O75145 1194 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 FOSP01100 380 aaPredicted RBP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 MMP1P03956 469 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 HOXC6P09630 235 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 ALAS1P13196 640 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PDCP20941 246 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 SYT1P21579 422 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 U2AF2P26368 475 aaKnown RBP eCLIP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 CALML3P27482 149 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 CTGFP29279 349 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 SLC4A3P48751 1232 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 RPS6P62753 249 aaKnown RBP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 LACTBP83111 547 aaPredicted RBP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PLS1Q14651 629 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 USH1GQ495M9 461 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 MORN1Q5T089 497 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 KRT40Q6A162 431 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 CCDC148Q8NFR7 591 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 CRYGNQ8WXF5 182 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PIBF1Q8WXW3 757 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 GPKOWQ92917 476 aaPredicted RBP eCLIP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PAGR1Q9BTK6 254 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 ACAD9Q9H845 621 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 EFCC1Q9HA90 598 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 C6orf50Q9HD87 102 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 RNF146Q9NTX7 359 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 VPS54Q9P1Q0 977 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 ISY1Q9ULR0 285 aaKnown RBP6.75□□□□□ -1.33
ABCF1-207ENST00000542772 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
ABCF1-207ENST00000542772 DOCK3Q8IZD9 2030 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 SLC15A5A6NIM6 579 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 GCOM1H8Y6P7 765 aaPredicted RBP6.74□□□□□ -1.33
ABCF1-207ENST00000542772 NFIBO00712 420 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 EDIL3O43854 480 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 GNRH1P01148 92 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 POLR2MP0CAP2 368 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 FCER1AP12319 257 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 NAPAP54920 295 aa6.74□□□□□ -1.33
ABCF1-207ENST00000542772 NLRP5P59047 1200 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms