RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 MAPK8IP1Q9UQF2 711 aa11.56□□□□□ -0.56
MRPS35-204ENST00000542199 DYRK3O43781 588 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 GJB6O95452 261 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 PMS1P54277 932 aaKnown RBP11.55□□□□□ -0.56
MRPS35-204ENST00000542199 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 TMEM132EQ6IEE7 984 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 MRM1Q6IN84 353 aaKnown RBP11.55□□□□□ -0.56
MRPS35-204ENST00000542199 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 SHKBP1Q8TBC3 707 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 C14orf93Q9H972 538 aaKnown RBP11.55□□□□□ -0.56
MRPS35-204ENST00000542199 MYOM2P54296 1465 aa11.55□□□□□ -0.56
MRPS35-204ENST00000542199 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 CCDC85CA6NKD9 419 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 WDR64B1ANS9 1081 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 U2SURPO15042 1029 aaKnown RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 DDAH1O94760 285 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 TP53P04637 393 aaPredicted RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 ETV3P41162 512 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 BMS1Q14692 1282 aaKnown RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 FAM178BQ8IXR5 827 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 VWCEQ96DN2 955 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 PIF1Q9H611 641 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
MRPS35-204ENST00000542199 STK26Q9P289 416 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
MRPS35-204ENST00000542199 PRR33A8MZF0 331 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 LRRN2O75325 713 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 KIAA1211LQ6NV74 962 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 SIRPGQ9P1W8 387 aa11.53□□□□□ -0.56
MRPS35-204ENST00000542199 EP400Q96L91 3159 aa11.52□□□□□ -0.57
MRPS35-204ENST00000542199 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
MRPS35-204ENST00000542199 CHMP4BP1P59074 171 aa11.52□□□□□ -0.57
MRPS35-204ENST00000542199 SLC7A5Q01650 507 aa11.52□□□□□ -0.57
MRPS35-204ENST00000542199 MKRN2Q9H000 416 aaKnown RBP11.52□□□□□ -0.57
MRPS35-204ENST00000542199 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
MRPS35-204ENST00000542199 RASA3Q14644 834 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 AXDND1Q5T1B0 1012 aaPredicted RBP11.51□□□□□ -0.57
MRPS35-204ENST00000542199 SFRP5Q5T4F7 317 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 DCAF15Q66K64 600 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
MRPS35-204ENST00000542199 FAM181AQ8N9Y4 354 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 AFF2P51816 1311 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
MRPS35-204ENST00000542199 CBX7O95931 251 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 FURINP09958 794 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 CYP27C1Q4G0S4 372 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 Q96M66 194 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 SNTG2Q9NY99 539 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 DHX57Q6P158 1386 aaKnown RBP11.5□□□□□ -0.57
MRPS35-204ENST00000542199 PXDNQ92626 1479 aa11.5□□□□□ -0.57
MRPS35-204ENST00000542199 FAM221BA6H8Z2 402 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 CYP27A1Q02318 531 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 ZDHHC13Q8IUH4 622 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 DEPDC7Q96QD5 511 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 ASPNQ9BXN1 380 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
MRPS35-204ENST00000542199 GSC2O15499 205 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 RNF4P78317 190 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 SNW1Q13573 536 aaKnown RBP11.48□□□□□ -0.57
MRPS35-204ENST00000542199 NCAPHQ15003 741 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 BBS9Q3SYG4 887 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 DUSP27Q5VZP5 1158 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 FBXL18Q96ME1 805 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
MRPS35-204ENST00000542199 LRRC4CQ9HCJ2 640 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 GTF2IRD1Q9UHL9 959 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
MRPS35-204ENST00000542199 ADGRB1O14514 1584 aa11.48□□□□□ -0.57
MRPS35-204ENST00000542199 DLC1Q96QB1 1528 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 SHOXO15266 292 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 ITIH2P19823 946 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 CYP7A1P22680 504 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 HAUS7Q99871 368 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 SUSD2Q9UGT4 822 aa11.47□□□□□ -0.57
MRPS35-204ENST00000542199 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
MRPS35-204ENST00000542199 IGHA1P01876 353 aa11.46□□□□□ -0.57
MRPS35-204ENST00000542199 EPHX1P07099 455 aa11.46□□□□□ -0.57
MRPS35-204ENST00000542199 NBPF9Q3BBW0 867 aa11.46□□□□□ -0.57
MRPS35-204ENST00000542199 DTWD2Q8NBA8 298 aa11.46□□□□□ -0.57
MRPS35-204ENST00000542199 METTL22Q9BUU2 404 aaPredicted RBP11.46□□□□□ -0.57
MRPS35-204ENST00000542199 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
MRPS35-204ENST00000542199 OXCT1P55809 520 aa11.45□□□□□ -0.58
MRPS35-204ENST00000542199 AUHQ13825 339 aaKnown RBP11.45□□□□□ -0.58
MRPS35-204ENST00000542199 MFSD4AQ8N468 514 aa11.45□□□□□ -0.58
MRPS35-204ENST00000542199 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
MRPS35-204ENST00000542199 MKL1Q969V6 931 aa11.45□□□□□ -0.58
MRPS35-204ENST00000542199 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
MRPS35-204ENST00000542199 FMN2Q9NZ56 1722 aa11.45□□□□□ -0.58
MRPS35-204ENST00000542199 PRR19A6NJB7 356 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms