RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 VWA5AO00534 786 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 ADD1P35611 737 aaKnown RBP19.42■□□□□ 0.7
UBC-208ENST00000540700 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
UBC-208ENST00000540700 FUT2Q10981 343 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 STK3Q13188 491 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 TMEM132BQ14DG7 1078 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 Q3C1V9 767 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 GPATCH4Q5T3I0 446 aaKnown RBP19.42■□□□□ 0.7
UBC-208ENST00000540700 TMTC3Q6ZXV5 915 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.42■□□□□ 0.7
UBC-208ENST00000540700 FAM161BQ96MY7 647 aa19.42■□□□□ 0.7
UBC-208ENST00000540700 VCANP13611 3396 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.75e-7■□□□□ 10.3
UBC-208ENST00000540700 RCAN1P53805 252 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 SCRN1Q12765 414 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 RTN1Q16799 776 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 LRRC26Q2I0M4 334 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 MAP3K21Q5TCX8 1036 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 FAM160B2Q86V87 743 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 ADGRF4Q8IZF3 695 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 PRPF38AQ8NAV1 312 aaKnown RBP19.41■□□□□ 0.7
UBC-208ENST00000540700 ZNF274Q96GC6 653 aaPredicted RBP19.41■□□□□ 0.7
UBC-208ENST00000540700 NUDT12Q9BQG2 462 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 RANBP17Q9H2T7 1088 aaKnown RBP19.41■□□□□ 0.7
UBC-208ENST00000540700 JMJD4Q9H9V9 463 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 SLC38A10Q9HBR0 1119 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 MORF4L1Q9UBU8 362 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 ZNF536O15090 1300 aa19.41■□□□□ 0.7
UBC-208ENST00000540700 CALM1P0DP23 149 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 CALM2P0DP24 149 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 CALM3P0DP25 149 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 CACNB2Q08289 660 aaPredicted RBP19.4■□□□□ 0.7
UBC-208ENST00000540700 IKQ13123 557 aaPredicted RBP19.4■□□□□ 0.7
UBC-208ENST00000540700 NTRK3Q16288 839 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 NECAB1Q8N987 351 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 CTCFLQ8NI51 663 aaPredicted RBP19.4■□□□□ 0.7
UBC-208ENST00000540700 CHURC1Q8WUH1 139 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 MTMR8Q96EF0 704 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 PAGR1Q9BTK6 254 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 RIOX1Q9H6W3 641 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 HOXC10Q9NYD6 342 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 ZNF214Q9UL59 606 aaPredicted RBP19.4■□□□□ 0.7
UBC-208ENST00000540700 CNTNAP5Q8WYK1 1306 aa19.4■□□□□ 0.7
UBC-208ENST00000540700 PFKFB2O60825 505 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 PPFIA3O75145 1194 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 COL6A1P12109 1028 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 CCND3P30281 292 aaPredicted RBP19.39■□□□□ 0.69
UBC-208ENST00000540700 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 CCAR1Q8IX12 1150 aaKnown RBP19.39■□□□□ 0.69
UBC-208ENST00000540700 GPRC5AQ8NFJ5 357 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 VAT1LQ9HCJ6 419 aa19.39■□□□□ 0.69
UBC-208ENST00000540700 COL11A1P12107 1806 aaPredicted RBP19.39■□□□□ 0.69
UBC-208ENST00000540700 DNAH12Q6ZR08 3092 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 PPP1R11O60927 126 aaPredicted RBP19.38■□□□□ 0.69
UBC-208ENST00000540700 ERVK-9P63128 1117 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 ERVK-24P63145 666 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 CCL14Q16627 93 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 CCDC174Q6PII3 467 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 CCDC82Q8N4S0 544 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 GUCD1Q96NT3 240 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 RAVER2Q9HCJ3 691 aaKnown RBP19.38■□□□□ 0.69
UBC-208ENST00000540700 RABGAP1Q9Y3P9 1069 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 RIPK3Q9Y572 518 aa19.38■□□□□ 0.69
UBC-208ENST00000540700 hCG_1642624A0A1W2PR95 340 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 CTDNEP1O95476 244 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 XRCC5P13010 732 aaKnown RBP19.37■□□□□ 0.69
UBC-208ENST00000540700 KIF5BP33176 963 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 CDC37Q16543 378 aaPredicted RBP19.37■□□□□ 0.69
UBC-208ENST00000540700 PIBF1Q8WXW3 757 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 AGBL1Q96MI9 1066 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 PIGSQ96S52 555 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 PORCNQ9H237 461 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 RBM28Q9NW13 759 aaKnown RBP19.37■□□□□ 0.69
UBC-208ENST00000540700 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
UBC-208ENST00000540700 ST18O60284 1047 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 QRICH1Q2TAL8 776 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 LHX8Q68G74 356 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 PHKBQ93100 1093 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 GTF3C6Q969F1 213 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 MOV10L1Q9BXT6 1211 aaKnown RBP19.36■□□□□ 0.69
UBC-208ENST00000540700 SPATC1LQ9H0A9 340 aa19.36■□□□□ 0.69
UBC-208ENST00000540700 POTEB2H3BUK9 544 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 ZBED4O75132 1171 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 MAPK4P31152 587 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 RGS2P41220 211 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 GNAQP50148 359 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 HOMER1Q86YM7 354 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 TRMT44Q8IYL2 757 aaKnown RBP19.35■□□□□ 0.69
UBC-208ENST00000540700 CPXCR1Q8N123 301 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
UBC-208ENST00000540700 GTF3C2Q8WUA4 911 aaPredicted RBP19.35■□□□□ 0.69
UBC-208ENST00000540700 LBHD1Q9BQE6 289 aaPredicted RBP19.35■□□□□ 0.69
UBC-208ENST00000540700 SLKQ9H2G2 1235 aaPredicted RBP19.35■□□□□ 0.69
UBC-208ENST00000540700 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
UBC-208ENST00000540700 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
UBC-208ENST00000540700 GPR142Q7Z601 462 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms